RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SPATA21Q7Z572 469 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 PCYOX1LQ8NBM8 494 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 STEAP2Q8NFT2 490 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 MFSD8Q8NHS3 518 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 NINJ1Q92982 152 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 S100PBPQ96BU1 408 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 RCN3Q96D15 328 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 KTI12Q96EK9 354 aaPredicted RBP14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 HS3ST6Q96QI5 342 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 ECSITQ9BQ95 431 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 SF3B5Q9BWJ5 86 aaKnown RBP14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 MYLK2Q9H1R3 596 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 EVA1AQ9H8M9 152 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 GID8Q9NWU2 228 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 TESQ9UGI8 421 aaKnown RBP14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 ITGB1BP2Q9UKP3 347 aa14.1□□□□□ -0.15
CTDSP1-209ENST00000488627 A0A087WUJ7 227 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 ELOA3DA6NLF2 546 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 M0R3H8 397 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 FMO6PO60774 539 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 PNMTP11086 282 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 COX4I1P13073 169 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 COX5AP20674 150 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 LSP1P33241 339 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 ELOA3BQ3SY89 546 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 ALG10BQ5I7T1 473 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 INTS11Q5TA45 600 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 FBXW9Q5XUX1 488 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 FBXW10Q5XX13 1052 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 TSPYL5Q86VY4 417 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 RBM45Q8IUH3 476 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 ZNF100Q8IYN0 542 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 ELOA3Q8NG57 546 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 OR6T1Q8NGN1 323 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 KISS1RQ969F8 398 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 TAAR8Q969N4 342 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 APH1AQ96BI3 265 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 TAPBPLQ9BX59 468 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 ADPRHL2Q9NX46 363 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 CMTM6Q9NX76 183 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 RPS6KB2Q9UBS0 482 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 SLC13A4Q9UKG4 626 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 FREM1Q5H8C1 2179 aa14.09□□□□□ -0.15
CTDSP1-209ENST00000488627 PRR14LQ5THK1 2151 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 CCT8L1PA6NM43 557 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 PDLIM1O00151 329 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 SNX3O60493 162 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 MRPL33O75394 65 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 LYPD3O95274 346 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 AHSA1O95433 338 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 IGHV3-9P01782 118 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 THY1P04216 161 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 RPS5P46782 204 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 CDH12P55289 794 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 FOXG1P55316 489 aaPredicted RBP14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 VEZF1Q14119 521 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 TAB1Q15750 504 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 C8orf82Q6P1X6 216 aaPredicted RBP14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 SEZ6L2Q6UXD5 910 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 PAMR1Q6UXH9 720 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 LINC00114Q6XXX2 140 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 P3H2Q8IVL5 708 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 SLC15A3Q8IY34 581 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 ZNF433Q8N7K0 673 aaPredicted RBP14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 OR9K2Q8NGE7 335 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 TMEM45BQ96B21 275 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 PIK3IP1Q96FE7 263 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 SLC47A1Q96FL8 570 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 ZNF385AQ96PM9 386 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 MCHR1Q99705 422 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 TMEM27Q9HBJ8 222 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 CCM2LQ9NUG4 571 aaPredicted RBP14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 MALT1Q9UDY8 824 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 SLC9A8Q9Y2E8 581 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 PLEKHA6Q9Y2H5 1048 aa14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 HRNRQ86YZ3 2850 aaPredicted RBP14.08□□□□□ -0.16
CTDSP1-209ENST00000488627 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 GMNCA6NCL1 334 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 LYZL6O75951 148 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 IL32P24001 234 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 LTBQ06643 244 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 BEX5Q5H9J7 111 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 TMEM225Q6GV28 225 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 ERICH5Q6P6B1 374 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 ZNF613Q6PF04 617 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 C5orf46Q6UWT4 87 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 SLC25A36Q96CQ1 311 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 USB1Q9BQ65 265 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 PCDHAC1Q9H158 963 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 PARPBPQ9NWS1 579 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 GMPR2Q9P2T1 348 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 SEC14L4Q9UDX3 406 aa14.07□□□□□ -0.16
CTDSP1-209ENST00000488627 TRAV36DV7A0A075B6V5 113 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 FAM220BPB1ANY3 271 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 AIM2O14862 343 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 VAMP5O95183 116 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 ATE1O95260 518 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 NCALDP61601 193 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms