RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TRAV26-1A0A087WT03 109 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 IGKV6D-21A0A0A0MT36 114 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 A6NIZ1 184 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 MPHOSPH10O00566 681 aaKnown RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 DYNC1I1O14576 645 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 GIPP09681 153 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 PNMA6AP0CW24 399 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 CCR1P32246 355 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 KLK7P49862 253 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 RAP1BP61224 184 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 C1orf61Q13536 156 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 MPPED2Q15777 294 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 ATP6AP1Q15904 470 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 SFT2D3Q587I9 215 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 C1orf100Q5SVJ3 147 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZSCAN25Q6NSZ9 544 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 EFL1Q7Z2Z2 1120 aaKnown RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 SLC26A11Q86WA9 606 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 NBPF5PQ86XG9 351 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 NUDCD3Q8IVD9 361 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 VSTM4Q8IW00 320 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 TBC1D21Q8IYX1 336 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 RDH10Q8IZV5 341 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR2L13Q8N349 312 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 MFSD9Q8NBP5 474 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 BHLHE23Q8NDY6 225 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 CCDC54Q8NEL0 328 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR6C4Q8NGE1 309 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR2T3Q8NH03 318 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 UFD1Q92890 307 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 SECISBP2Q96T21 854 aaKnown RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 MBOAT4Q96T53 435 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 RNF2Q99496 336 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 NPAS2Q99743 824 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 ECSITQ9BQ95 431 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 CRACR2AQ9BSW2 395 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 CAPS2Q9BXY5 557 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 PARD6BQ9BYG5 372 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 ACTR6Q9GZN1 396 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 GBA3Q9H227 469 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 GORASP2Q9H8Y8 452 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 SGK2Q9HBY8 427 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 RAB18Q9NP72 206 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 IL26Q9NPH9 171 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 ABCB10Q9NRK6 738 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 THUMPD1Q9NXG2 353 aaKnown RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 MTRF1LQ9UGC7 380 aaKnown RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 PTBP2Q9UKA9 531 aaKnown RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 STAP1Q9ULZ2 295 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 PIGLQ9Y2B2 252 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 POLDIP2Q9Y2S7 368 aa2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 RAI1Q7Z5J4 1906 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P36-201ENST00000487709 PLEKHH1Q9ULM0 1364 aa2.59□□□□□ -2
HMGB1P36-201ENST00000487709 FAM240BA0A1B0GVZ2 78 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 TCRBV9S1A1TA0A576 114 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 GJE1A6NN92 205 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 SPAG6O75602 509 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 STAMBPO95630 424 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 INSP01308 110 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 IGHV4-34P06331 123 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ICAM2P13598 275 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 FMO3P31513 532 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 HSD17B2P37059 387 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 SLC26A3P40879 764 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 PTGDSP41222 190 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 CASP4P49662 377 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF133P52736 654 aaPredicted RBP2.58□□□□□ -2
HMGB1P36-201ENST00000487709 DLX1P56177 255 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ACTR1AP61163 376 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ERVK-25P63136 954 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 KLRB1Q12918 225 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 OXA1LQ15070 435 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 NRF1Q16656 503 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 FILIP1LQ4L180 1135 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 DMRTC1Q5HYR2 192 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 PAGE3Q5JUK9 113 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 OR4F3Q6IEY1 312 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 C6orf89Q6UWU4 347 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 RUFY3Q7L099 469 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 PNKDQ8N490 385 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 FAM71E2Q8N5Q1 922 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ACOT4Q8N9L9 421 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 NKAPP1Q8N9T2 125 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 OR6X1Q8NH79 312 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 OR9G1Q8NH87 305 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 BLOC1S5Q8TDH9 187 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 CHCHD10Q8WYQ3 142 aaPredicted RBP2.58□□□□□ -2
HMGB1P36-201ENST00000487709 FGF11Q92914 225 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 TM4SF19Q96DZ7 209 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 NUS1Q96E22 293 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF799Q96GE5 643 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 TIMD4Q96H15 378 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF641Q96N77 438 aaPredicted RBP2.58□□□□□ -2
HMGB1P36-201ENST00000487709 KCNA7Q96RP8 456 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 TBX15Q96SF7 602 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ZBTB18Q99592 522 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 NRTNQ99748 197 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 TSG101Q99816 390 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 RASL11BQ9BPW5 248 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 SIAEQ9HAT2 523 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms