RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 C6orf89Q6UWU4 347 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 CASP12Q6UXS9 341 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 SSX8Q7RTT4 187 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 GPAT4Q86UL3 456 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 PTOV1Q86YD1 416 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 P3H2Q8IVL5 708 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 ZNF611Q8N823 705 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 LSMEM1Q8N8F7 131 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 OR9K2Q8NGE7 335 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 OR52E4Q8NGH9 312 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 AKAP1Q92667 903 aaKnown RBP eCLIP10.09□□□□□ -0.79
SPEN-205ENST00000487496 TMEM45BQ96B21 275 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 MUCL1Q96DR8 90 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 MUS81Q96NY9 551 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 ZNF385AQ96PM9 386 aaKnown RBP10.09□□□□□ -0.79
SPEN-205ENST00000487496 ZNF607Q96SK3 696 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 CGREF1Q99674 301 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 PRR14Q9BWN1 585 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 TMEM120AQ9BXJ8 343 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 C12orf10Q9HB07 376 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 DLL4Q9NR61 685 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 TAS2R16Q9NYV7 291 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 RPS6KB2Q9UBS0 482 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 ACANP16112 2415 aa10.09□□□□□ -0.79
SPEN-205ENST00000487496 RAI1Q7Z5J4 1906 aaPredicted RBP10.09□□□□□ -0.79
SPEN-205ENST00000487496 DSCAMO60469 2012 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 A0A1B0GWA3 101 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 CIB4A0PJX0 185 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 PRORSD1PA6NEY8 169 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 ELOA3DA6NLF2 546 aaPredicted RBP10.08□□□□□ -0.8
SPEN-205ENST00000487496 CCT8L1PA6NM43 557 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 FTCDNL1E5RQL4 147 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 PDLIM1O00151 329 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 MFN2O95140 757 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 VAMP5O95183 116 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 AHSA1O95433 338 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 ITGA5P08648 1049 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 FOSL1P15407 271 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 PCBP3P57721 371 aaKnown RBP10.08□□□□□ -0.8
SPEN-205ENST00000487496 RGS8P57771 180 aaPredicted RBP10.08□□□□□ -0.8
SPEN-205ENST00000487496 DMTNQ08495 405 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 RBBP4Q09028 425 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 NFYCQ13952 458 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 GABRA6Q16445 453 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 CYP51A1Q16850 503 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 ELOA3BQ3SY89 546 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 Q5PR19 223 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 TSPO2Q5TGU0 170 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 AAED1Q7RTV5 226 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 ARMC8Q8IUR7 673 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 C11orf65Q8NCR3 313 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 BHLHE22Q8NFJ8 381 aaPredicted RBP10.08□□□□□ -0.8
SPEN-205ENST00000487496 ELOA3Q8NG57 546 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 MFSD8Q8NHS3 518 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 SLC25A36Q96CQ1 311 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 KTI12Q96EK9 354 aaPredicted RBP10.08□□□□□ -0.8
SPEN-205ENST00000487496 PERPQ96FX8 193 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 WFDC6Q9BQY6 131 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 PTDSS2Q9BVG9 487 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 TRIM2Q9C040 744 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 PIF1Q9H611 641 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 KAT8Q9H7Z6 458 aaKnown RBP10.08□□□□□ -0.8
SPEN-205ENST00000487496 SLC7A10Q9NS82 523 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 FGFR1OP2Q9NVK5 253 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 NPAP1Q9NZP6 1156 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 UPB1Q9UBR1 384 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 ANGPT4Q9Y264 503 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 ARID1AO14497 2285 aa10.08□□□□□ -0.8
SPEN-205ENST00000487496 M0QX08 132 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 FBP2O00757 339 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 TPST2O60704 377 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 TROVE2P10155 538 aaKnown RBP eCLIP10.07□□□□□ -0.8
SPEN-205ENST00000487496 PNMTP11086 282 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 RPS5P46782 204 aaKnown RBP10.07□□□□□ -0.8
SPEN-205ENST00000487496 ARFIP2P53365 341 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 RIPPLY3P57055 190 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 SF3A3Q12874 501 aaKnown RBP eCLIP10.07□□□□□ -0.8
SPEN-205ENST00000487496 ALG10BQ5I7T1 473 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 C9orf135Q5VTT2 229 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 FAM91A1Q658Y4 838 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 OR7E24Q6IFN5 339 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 CGB2Q6NT52 195 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 ULK3Q6PHR2 472 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 PRSS57Q6UWY2 283 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 CREB3L2Q70SY1 520 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 EPHX4Q8IUS5 362 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 KDM8Q8N371 416 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 SMYD1Q8NB12 490 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 KBTBD8Q8NFY9 601 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 OR52N5Q8NH56 324 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 TMEM171Q8WVE6 324 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 DNAJA4Q8WW22 397 aaPredicted RBP10.07□□□□□ -0.8
SPEN-205ENST00000487496 NEUROG1Q92886 237 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 GSX2Q9BZM3 304 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 TESQ9UGI8 421 aaKnown RBP10.07□□□□□ -0.8
SPEN-205ENST00000487496 SLC13A4Q9UKG4 626 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 RASD1Q9Y272 281 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 SLC25A15Q9Y619 301 aa10.07□□□□□ -0.8
SPEN-205ENST00000487496 CADP27708 2225 aa10.06□□□□□ -0.8
SPEN-205ENST00000487496 VPS13CQ709C8 3753 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms