RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 AURKBQ96GD4 344 aaPredicted RBP10.68□□□□□ -0.7
VPS16-208ENST00000487461 SF3B5Q9BWJ5 86 aaKnown RBP10.68□□□□□ -0.7
VPS16-208ENST00000487461 HEATR1Q9H583 2144 aaKnown RBP10.68□□□□□ -0.7
VPS16-208ENST00000487461 PRDM4Q9UKN5 801 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 AMDHD2Q9Y303 409 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 DSPPQ9NZW4 1301 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 TMEM120BA0PK00 339 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 AQP7P3A6NL99 342 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 GPIP06744 558 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 PRG2P13727 222 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 UQCRBP14927 111 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 CDH2P19022 906 aaPredicted RBP10.67□□□□□ -0.7
VPS16-208ENST00000487461 APOBEC3AP31941 199 aaPredicted RBP10.67□□□□□ -0.7
VPS16-208ENST00000487461 CRATP43155 626 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 P2RY4P51582 365 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 DSCR9P59020 149 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 PRPS1P60891 318 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 TGFBR3Q03167 851 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 MST1LQ2TV78 715 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 GTDC1Q4AE62 458 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 GLIPR1L2Q4G1C9 344 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 SLC9B1Q4ZJI4 515 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 LIN52Q52LA3 116 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 RPS26P11Q5JNZ5 115 aaPredicted RBP10.67□□□□□ -0.7
VPS16-208ENST00000487461 WBP2NLQ6ICG8 309 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 HMBOX1Q6NT76 420 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 CLEC2AQ6UVW9 174 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 AAED1Q7RTV5 226 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 ZNF525Q8N782 197 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 SPATA3Q8NHX4 192 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 MGARPQ8TDB4 240 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 MAELQ96JY0 434 aaKnown RBP10.67□□□□□ -0.7
VPS16-208ENST00000487461 TPT1P8Q9HAU6 139 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 P2RX2Q9UBL9 471 aa10.67□□□□□ -0.7
VPS16-208ENST00000487461 ZNF443Q9Y2A4 671 aaPredicted RBP10.67□□□□□ -0.7
VPS16-208ENST00000487461 ELOA3DA6NLF2 546 aaPredicted RBP10.66□□□□□ -0.7
VPS16-208ENST00000487461 A8MV72 311 aaPredicted RBP10.66□□□□□ -0.7
VPS16-208ENST00000487461 A8MVM7 634 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 H7C417 338 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 KLF11O14901 512 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 BCHEP06276 602 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 ZCCHC18P0CG32 403 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 IDO1P14902 403 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 CRISP3P54108 245 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 DSTNP60981 165 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 COPZ1P61923 177 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 LGALS3BPQ08380 585 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 LOXL1Q08397 574 aaPredicted RBP10.66□□□□□ -0.7
VPS16-208ENST00000487461 TMEM249Q2WGJ8 235 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 ELOA3BQ3SY89 546 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 HIKESHIQ53FT3 197 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 TMEM225Q6GV28 225 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 MAVSQ7Z434 540 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 CROCCP2Q86T23 111 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 GPAT4Q86UL3 456 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 POMGNT2Q8NAT1 580 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 ELOA3Q8NG57 546 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 NANOS1Q8WY41 292 aaKnown RBP10.66□□□□□ -0.7
VPS16-208ENST00000487461 BOD1Q96IK1 185 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 ITCHQ96J02 903 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 OR52B2Q96RD2 323 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 TNFRSF13CQ96RJ3 184 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 PIF1Q9H611 641 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 FKRPQ9H9S5 495 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 SDR39U1Q9NRG7 319 aaPredicted RBP10.66□□□□□ -0.7
VPS16-208ENST00000487461 ADPRHL2Q9NX46 363 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 CALML5Q9NZT1 146 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 ZIM2Q9NZV7 527 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 ZNF232Q9UNY5 417 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 MOKQ9UQ07 419 aa10.66□□□□□ -0.7
VPS16-208ENST00000487461 A0A0G2JPF8 293 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 HNRNPCL2B2RXH8 293 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 HNRNPCL3B7ZW38 293 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 ATP6V1G2-DDX39BF2Z307 99 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 SLCO1B7G3V0H7 640 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 HNRNPCL1O60812 293 aaKnown RBP10.65□□□□□ -0.7
VPS16-208ENST00000487461 NPIPB7O75200 414 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 ANP32DO95626 131 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 LGI1O95970 557 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 WNT11O96014 354 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 NUDT7P0C024 238 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 HNRNPCL4P0DMR1 293 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 SELENOPP49908 381 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 EFNA4P52798 201 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 HOXC5Q00444 222 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 CHRNB3Q05901 458 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 LARS2Q15031 903 aaKnown RBP10.65□□□□□ -0.7
VPS16-208ENST00000487461 C1QTNF12Q5T7M4 302 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 RNF220Q5VTB9 566 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 C1orf140Q5VVS0 124 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 ATG16L1Q676U5 607 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 CREB3L2Q70SY1 520 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 LINGO2Q7L985 606 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 SERPINA11Q86U17 422 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 EPHX4Q8IUS5 362 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 OR9I1Q8NGQ6 314 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 FAM168AQ92567 244 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 VPS33AQ96AX1 596 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 C3orf49Q96BT1 292 aa10.65□□□□□ -0.7
VPS16-208ENST00000487461 TMEM19Q96HH6 336 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms