RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 COQ8BQ96D53 544 aa12.86□□□□□ -0.35
PFDN4-204ENST00000487129 ZG16BQ96DA0 208 aa12.86□□□□□ -0.35
PFDN4-204ENST00000487129 AURKBQ96GD4 344 aaPredicted RBP12.86□□□□□ -0.35
PFDN4-204ENST00000487129 KCNS3Q9BQ31 491 aa12.86□□□□□ -0.35
PFDN4-204ENST00000487129 ZNF747Q9BV97 191 aa12.86□□□□□ -0.35
PFDN4-204ENST00000487129 LPAR2Q9HBW0 351 aa12.86□□□□□ -0.35
PFDN4-204ENST00000487129 GIMAP2Q9UG22 337 aa12.86□□□□□ -0.35
PFDN4-204ENST00000487129 FBXO9Q9UK97 447 aaPredicted RBP12.86□□□□□ -0.35
PFDN4-204ENST00000487129 USP22Q9UPT9 525 aa12.86□□□□□ -0.35
PFDN4-204ENST00000487129 VWFP04275 2813 aa12.86□□□□□ -0.35
PFDN4-204ENST00000487129 TMEM72A0PK05 275 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 ZNF503-AS2A6NEH8 195 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 CLDN24A6NM45 220 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 TRIM13O60858 407 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 LIMS1P48059 325 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 LMO4P61968 165 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 HBA1P69905 142 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 IL1RL1Q01638 556 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 IFFO1Q0D2I5 559 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 PTGR1Q14914 329 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 UGT3A2Q3SY77 523 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 KANK2Q63ZY3 851 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 TYW3Q6IPR3 259 aaKnown RBP12.85□□□□□ -0.35
PFDN4-204ENST00000487129 AAED1Q7RTV5 226 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 SPATA21Q7Z572 469 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 TMEM99Q8N816 258 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 ZDHHC22Q8N966 263 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 OR9K2Q8NGE7 335 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 ZNF563Q8TA94 476 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 MAGEE2Q8TD90 523 aaPredicted RBP12.85□□□□□ -0.35
PFDN4-204ENST00000487129 CKAP2Q8WWK9 683 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 ALKBH3Q96Q83 286 aaPredicted RBP12.85□□□□□ -0.35
PFDN4-204ENST00000487129 LRRC37BQ96QE4 947 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 TMEM109Q9BVC6 243 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 GATA5Q9BWX5 397 aaPredicted RBP12.85□□□□□ -0.35
PFDN4-204ENST00000487129 TPK1Q9H3S4 243 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 G6PC2Q9NQR9 355 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 TMEM45AQ9NWC5 275 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 OSGIN1Q9UJX0 560 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 PCDHGB4Q9UN71 923 aa12.85□□□□□ -0.35
PFDN4-204ENST00000487129 LOC105371242A0A075B767 164 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 TMED7-TICAM2A0A0A6YYA0 188 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 IGHV2OR16-5A0A0B4J2B6 119 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 A0A0G2JK05 382 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 SH3PXD2BA1X283 911 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 AP3D1O14617 1153 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 AZIN1O14977 448 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 ZNF208O43345 1280 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 AK1P00568 194 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 ADRA2AP08913 450 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 GAAP10253 952 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 DDX5P17844 614 aaKnown RBP12.84□□□□□ -0.35
PFDN4-204ENST00000487129 HPCAL1P37235 193 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 PCLAFQ15004 111 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 SPDYE7PQ495Y7 208 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 GALNTL6Q49A17 601 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 OTUD3Q5T2D3 398 aaPredicted RBP12.84□□□□□ -0.35
PFDN4-204ENST00000487129 CLEC4FQ8N1N0 589 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 MOAP1Q96BY2 351 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 APOPT1Q96IL0 206 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 ZNF317Q96PQ6 595 aaPredicted RBP12.84□□□□□ -0.35
PFDN4-204ENST00000487129 SF3B5Q9BWJ5 86 aaKnown RBP12.84□□□□□ -0.35
PFDN4-204ENST00000487129 NARFLQ9H6Q4 476 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 EXOSC3Q9NQT5 275 aaKnown RBP12.84□□□□□ -0.35
PFDN4-204ENST00000487129 SLC35A3Q9Y2D2 325 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 TMED7Q9Y3B3 224 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 GRIP1Q9Y3R0 1128 aa12.84□□□□□ -0.35
PFDN4-204ENST00000487129 A0A096LPE4 126 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 A0A1W2PPZ6 126 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 AQP7P3A6NL99 342 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 TMEM233B4DJY2 109 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 AKR7A3O95154 331 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 ERCC1P07992 297 aaPredicted RBP12.83□□□□□ -0.36
PFDN4-204ENST00000487129 GUSBP08236 651 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 FGF4P08620 206 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 CREB1P16220 341 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 PAX7P23759 505 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 COL8A2P25067 703 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 IDH2P48735 452 aaKnown RBP12.83□□□□□ -0.36
PFDN4-204ENST00000487129 SELENOPP49908 381 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 SCGB2A2Q13296 93 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 SHQ1Q6PI26 577 aaKnown RBP12.83□□□□□ -0.36
PFDN4-204ENST00000487129 SHISA2Q6UWI4 295 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 FRRS1Q6ZNA5 592 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 C6orf120Q7Z4R8 191 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 HMGN2P46Q86SG4 172 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 RIMKLAQ8IXN7 391 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 MREGQ8N565 214 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 KRTCAP2Q8N6L1 136 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 MIPOL1Q8TD10 442 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 OIT3Q8WWZ8 545 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 CNOT9Q92600 299 aaKnown RBP12.83□□□□□ -0.36
PFDN4-204ENST00000487129 NAA11Q9BSU3 229 aaPredicted RBP12.83□□□□□ -0.36
PFDN4-204ENST00000487129 PIF1Q9H611 641 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 DYNLRB1Q9NP97 96 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 TREM2Q9NZC2 230 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 FIS1Q9Y3D6 152 aa12.83□□□□□ -0.36
PFDN4-204ENST00000487129 PRAMEF27A3QJZ7 478 aa12.82□□□□□ -0.36
PFDN4-204ENST00000487129 LIPT2A6NK58 231 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms