RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 HOXC5Q00444 222 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 LARS2Q15031 903 aaKnown RBP21.53■■□□□ 1.04
LIME1-206ENST00000487026 RNF220Q5VTB9 566 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 SLC2A7Q6PXP3 512 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 DNM1P46Q6ZS02 220 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 MSANTD1Q6ZTZ1 278 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 AAED1Q7RTV5 226 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 SERPINA11Q86U17 422 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 HTRA1Q92743 480 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 GTF2H4Q92759 462 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 DHRS9Q9BPW9 319 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 CACNG6Q9BXT2 260 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 AMBRA1Q9C0C7 1298 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 SLC17A5Q9NRA2 495 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 ADPRHL2Q9NX46 363 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 DCTN4Q9UJW0 460 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 ADAM21Q9UKJ8 722 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 ZNF232Q9UNY5 417 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 SONP18583 2426 aaKnown RBP21.53■■□□□ 1.04
LIME1-206ENST00000487026 A0A0G2JPF8 293 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 FAM234BA2RU67 622 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 AQP7P3A6NL99 342 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 A8MVM7 634 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 HNRNPCL2B2RXH8 293 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 HNRNPCL3B7ZW38 293 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 FRS3O43559 492 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 HNRNPCL1O60812 293 aaKnown RBP21.52■■□□□ 1.04
LIME1-206ENST00000487026 HNRNPCL4P0DMR1 293 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 FABP6P51161 128 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 BEND6Q5SZJ8 279 aaPredicted RBP21.52■■□□□ 1.04
LIME1-206ENST00000487026 EPGNQ6UW88 154 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 MAL2Q969L2 176 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 TMEM45BQ96B21 275 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 SPATA9Q9BWV2 254 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 PAIP1Q9H074 479 aaKnown RBP21.52■■□□□ 1.04
LIME1-206ENST00000487026 USH1CQ9Y6N9 552 aa21.52■■□□□ 1.04
LIME1-206ENST00000487026 TMEM247A6NEH6 219 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 LGALS3BPQ08380 585 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 RGNQ15493 299 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 ZNF311Q5JNZ3 666 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 TMEM225Q6GV28 225 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 C11orf71Q6IPW1 123 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 FBXL14Q8N1E6 418 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 DEPDC4Q8N2C3 294 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 MUC15Q8N387 334 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 C3orf49Q96BT1 292 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 SF3B5Q9BWJ5 86 aaKnown RBP21.51■■□□□ 1.03
LIME1-206ENST00000487026 TAPBPLQ9BX59 468 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 BARX1Q9HBU1 254 aaPredicted RBP21.51■■□□□ 1.03
LIME1-206ENST00000487026 CBLN4Q9NTU7 201 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 ATP23Q9Y6H3 246 aa21.51■■□□□ 1.03
LIME1-206ENST00000487026 CR1P17927 2039 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 CLIC1O00299 241 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 KLF11O14901 512 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 MPGP29372 298 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 P2RY4P51582 365 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 TGFBR3Q03167 851 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 HIKESHIQ53FT3 197 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 C1orf140Q5VVS0 124 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 MDFIQ99750 246 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 CACYBPQ9HB71 228 aaKnown RBP21.5■■□□□ 1.03
LIME1-206ENST00000487026 THUMPD1Q9NXG2 353 aaKnown RBP21.5■■□□□ 1.03
LIME1-206ENST00000487026 AMDHD2Q9Y303 409 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 IFT52Q9Y366 437 aa21.5■■□□□ 1.03
LIME1-206ENST00000487026 HEATR1Q9H583 2144 aaKnown RBP21.49■■□□□ 1.03
LIME1-206ENST00000487026 ERLIN1O75477 346 aa21.49■■□□□ 1.03
LIME1-206ENST00000487026 DMTNQ08495 405 aa21.49■■□□□ 1.03
LIME1-206ENST00000487026 ZSWIM7Q19AV6 140 aa21.49■■□□□ 1.03
LIME1-206ENST00000487026 C1orf162Q8NEQ5 155 aaPredicted RBP21.49■■□□□ 1.03
LIME1-206ENST00000487026 ADAD1Q96M93 576 aaKnown RBP21.49■■□□□ 1.03
LIME1-206ENST00000487026 ABCA1O95477 2261 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 IGHV4-30-2A0A087WSY4 118 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 NPIPB7O75200 414 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 CRLF1O75462 422 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 KRT33AO76009 404 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 SELENOPP49908 381 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 NUDT6P53370 316 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 NRF1Q16656 503 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 CREB3L2Q70SY1 520 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 KDM8Q8N371 416 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 C17orf78Q8N4C9 275 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 POMGNT2Q8NAT1 580 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 SLC25A36Q96CQ1 311 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 RHNO1Q9BSD3 238 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 RSPO3Q9BXY4 272 aaPredicted RBP21.48■■□□□ 1.03
LIME1-206ENST00000487026 ARMC7Q9H6L4 198 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 A4GALTQ9NPC4 353 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 SLAMF8Q9P0V8 285 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 PRDM4Q9UKN5 801 aa21.48■■□□□ 1.03
LIME1-206ENST00000487026 TMEM229AB2RXF0 380 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 TP53P04637 393 aaPredicted RBP21.47■■□□□ 1.03
LIME1-206ENST00000487026 HOXB9P17482 250 aaPredicted RBP21.47■■□□□ 1.03
LIME1-206ENST00000487026 PRPS1P60891 318 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 RAB35Q15286 201 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 PRAMEF8Q5VWM4 474 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 PRAMEF7Q5VXH5 474 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 EPHX4Q8IUS5 362 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 FUNDC1Q8IVP5 155 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 EBF4Q9BQW3 602 aa21.47■■□□□ 1.03
LIME1-206ENST00000487026 BCL2L10Q9HD36 194 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms