RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 IGLV3-19P01714 112 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 PSMB10P40306 273 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
PTCD2-204ENST00000486995 LGALS3BPQ08380 585 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTCD2-204ENST00000486995 SNAP47Q5SQN1 464 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 HACD4Q5VWC8 232 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 LYPD4Q6UWN0 246 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 UNQ9370/PRO34162Q6UXP9 181 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 SLITRK4Q8IW52 837 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 YIPF5Q969M3 257 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 RASD2Q96D21 266 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 NECTIN4Q96NY8 510 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 TRAF4Q9BUZ4 470 aaPredicted RBP11.28□□□□□ -0.6
PTCD2-204ENST00000486995 GPR174Q9BXC1 333 aa11.28□□□□□ -0.6
PTCD2-204ENST00000486995 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
PTCD2-204ENST00000486995 AK6Q9Y3D8 172 aaKnown RBP11.28□□□□□ -0.6
PTCD2-204ENST00000486995 TMEM184BQ9Y519 407 aaPredicted RBP11.28□□□□□ -0.6
PTCD2-204ENST00000486995 BLACEA4D250 179 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 UBL3O95164 117 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 CD3GP09693 182 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 EDNRAP25101 427 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 MMP15P51511 669 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 MAB21L1Q13394 359 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 RAB30Q15771 203 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 ISXQ2M1V0 245 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 CCDC58Q4VC31 144 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 SLC35D3Q5M8T2 416 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 OVCH1Q7RTY7 1134 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 METTL27Q8N6F8 245 aaPredicted RBP11.27□□□□□ -0.6
PTCD2-204ENST00000486995 MOSPD2Q8NHP6 518 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 TCTN2Q96GX1 697 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 HSPA12BQ96MM6 686 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 ORAI3Q9BRQ5 295 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 GON7Q9BXV9 100 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 BRD7Q9NPI1 651 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 C2orf42Q9NWW7 574 aa11.27□□□□□ -0.6
PTCD2-204ENST00000486995 CEP290O15078 2479 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 ZNF749O43361 778 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 CPNE3O75131 537 aaKnown RBP11.27□□□□□ -0.61
PTCD2-204ENST00000486995 GABRA4P48169 554 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 SKP1P63208 163 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 DGCR2P98153 550 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-204ENST00000486995 BCL2L15Q5TBC7 163 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 LINC01590Q5TEZ4 76 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 ESPNLQ6ZVH7 1005 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 PARGQ86W56 976 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 PLCZ1Q86YW0 608 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 OR6C4Q8NGE1 309 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 OR6K6Q8NGW6 343 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 MMABQ96EY8 250 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-204ENST00000486995 ZNF578Q96N58 590 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-204ENST00000486995 GPX7Q96SL4 187 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-204ENST00000486995 GTPBP2Q9BX10 602 aaKnown RBP11.27□□□□□ -0.61
PTCD2-204ENST00000486995 SPATA2Q9UM82 520 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 TDRD6O60522 2096 aaKnown RBP11.27□□□□□ -0.61
PTCD2-204ENST00000486995 HEATR5AQ86XA9 2040 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 A0A0C4DFX4 3053 aa11.27□□□□□ -0.61
PTCD2-204ENST00000486995 PRR32B1ATL7 298 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 IDSB3KWA1 339 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 PIN1P1O15428 100 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 IFNA16P05015 189 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 CDKN2AP42771 156 aaKnown RBP11.26□□□□□ -0.61
PTCD2-204ENST00000486995 BLKP51451 505 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 PRPS1P60891 318 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-204ENST00000486995 LAMTOR1Q6IAA8 161 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 Q6ZS52 159 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 SIAH3Q8IW03 269 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 TOMM5Q8N4H5 51 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 GATSQ8NAP1 163 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 FAM71CQ8NEG0 241 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 ADAMTS18Q8TE60 1221 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-204ENST00000486995 KLHDC7BQ96G42 594 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 ZNF285Q96NJ3 590 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 ZFP3Q96NJ6 502 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 SLC19A3Q9BZV2 496 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 NUDT15Q9NV35 164 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 WSB2Q9NYS7 404 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-204ENST00000486995 MRPS7Q9Y2R9 242 aaKnown RBP11.26□□□□□ -0.61
PTCD2-204ENST00000486995 TRAV6A0A075B6T7 132 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 A0A1W2PPC4 97 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 FAM171A2A8MVW0 826 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 OIP5O43482 229 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 AKR7A2O43488 359 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 ZNF780AO75290 641 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-204ENST00000486995 SRMP19623 302 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 HSD17B7P56937 341 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 GALK2Q01415 458 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 CD226Q15762 336 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 HSD17B12Q53GQ0 312 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 RNASE12Q5GAN4 147 aaKnown RBP11.26□□□□□ -0.61
PTCD2-204ENST00000486995 ZNF684Q5T5D7 378 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 FNDC7Q5VTL7 733 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 MED25Q71SY5 747 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 OR51Q1Q8NH59 317 aa11.26□□□□□ -0.61
PTCD2-204ENST00000486995 RPS4Y2Q8TD47 263 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms