RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TBCCD1Q9NVR7 557 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 LSM2Q9Y333 95 aaKnown RBP23.83■■□□□ 1.4
SHOX2-204ENST00000483851 SLC6A5Q9Y345 797 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 TMED7-TICAM2A0A0A6YYA0 188 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 A8MVM7 634 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 TNFSF15O95150 251 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 PPP1R3DO95685 299 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 TSPAN19P0C672 248 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 APEHP13798 732 aaKnown RBP23.82■■□□□ 1.4
SHOX2-204ENST00000483851 APOBEC1P41238 236 aaKnown RBP23.82■■□□□ 1.4
SHOX2-204ENST00000483851 CASP3P42574 277 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 SSR4P51571 173 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 MLF1P58340 268 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 RPS18P62269 152 aaKnown RBP23.82■■□□□ 1.4
SHOX2-204ENST00000483851 ADCK1Q86TW2 530 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 PROKR2Q8NFJ6 384 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 OR6S1Q8NH40 331 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 FRMD6Q96NE9 622 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 NRIP3Q9NQ35 241 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 TMED7Q9Y3B3 224 aa23.82■■□□□ 1.4
SHOX2-204ENST00000483851 C17orf51A8MQB3 221 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 NPIPB7O75200 414 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 SLC2A10O95528 541 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 CELA2AP08217 269 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 FTH1P19P0C7X4 201 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 NOS3P29474 1203 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 CLK1P49759 484 aaKnown RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 ZNF362Q5T0B9 420 aaPredicted RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 DCDC5Q6ZRR9 648 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 BTLAQ7Z6A9 289 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 ADGRG3Q86Y34 549 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 ASB15Q8WXK1 588 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 MND1Q9BWT6 205 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 TAPBPLQ9BX59 468 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 GALNT9Q9HCQ5 603 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 CHCHD2Q9Y6H1 151 aaPredicted RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 PRR23D1E9PI22 279 aaPredicted RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 PRR23D2P0DMB1 279 aaPredicted RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 PRKCAP17252 672 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 PAICSP22234 425 aaKnown RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 CD82P27701 267 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 SLC25A53Q5H9E4 307 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 H3F3CQ6NXT2 135 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 ATCAYQ86WG3 371 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 TMPRSS12Q86WS5 348 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 C10orf53Q8N6V4 93 aa23.81■■□□□ 1.4
SHOX2-204ENST00000483851 KTI12Q96EK9 354 aaPredicted RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 ERMAPQ96PL5 475 aaPredicted RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 EXOGQ9Y2C4 368 aaKnown RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 EXOSC1Q9Y3B2 195 aaKnown RBP23.81■■□□□ 1.4
SHOX2-204ENST00000483851 LRRN3E7EW58 273 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 STMND1H3BQB6 276 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 GMFGO60234 142 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 SUSD5O60279 629 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 RAD1O60671 282 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 BMP4P12644 408 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 DLSTP36957 453 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 SLC35F1Q5T1Q4 408 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 NIPAL3Q6P499 406 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 USP43Q70EL4 1123 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 MEPCEQ7L2J0 689 aaKnown RBP23.8■■□□□ 1.4
SHOX2-204ENST00000483851 MGLLQ99685 303 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 NXF2Q9GZY0 626 aaKnown RBP23.8■■□□□ 1.4
SHOX2-204ENST00000483851 CDCP1Q9H5V8 836 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 FBXL4Q9UKA2 621 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 A3GALT2U3KPV4 340 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 MPDZO75970 2070 aa23.8■■□□□ 1.4
SHOX2-204ENST00000483851 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.79■■□□□ 1.4
SHOX2-204ENST00000483851 METTL15A6NJ78 407 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 SLC22A31A6NKX4 558 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 IMPA2O14732 288 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 OR2T1O43869 369 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 HIST1H2ABP04908 130 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 SERPINA7P05543 415 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 MYL12AP19105 171 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 UQCRC1P31930 480 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 RPL4P36578 427 aaKnown RBP23.79■■□□□ 1.4
SHOX2-204ENST00000483851 ITGADQ13349 1161 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 PLBD1Q6P4A8 553 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 HIST3H2AQ7L7L0 130 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 RAB43Q86YS6 212 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 NANOGP1Q8N7R0 232 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 HIST1H2ACQ93077 130 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 TAAR8Q969N4 342 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 MOGAT1Q96PD6 335 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 JAM3Q9BX67 310 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 OR51E2Q9H255 320 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 CHCHD3Q9NX63 227 aaKnown RBP23.79■■□□□ 1.4
SHOX2-204ENST00000483851 P4HTMQ9NXG6 502 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 KNTC1P50748 2209 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 MCIDASD6RGH6 385 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 BGLAPP02818 100 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 CSRP1P21291 193 aaKnown RBP23.79■■□□□ 1.4
SHOX2-204ENST00000483851 LTBQ06643 244 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 FAM69AQ5T7M9 428 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 COX4I2Q96KJ9 171 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 MRGPRX4Q96LA9 322 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 IP6K3Q96PC2 410 aa23.79■■□□□ 1.4
SHOX2-204ENST00000483851 MED11Q9P086 117 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms