RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 IQCF1Q8N6M8 205 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 MFSD8Q8NHS3 518 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 FANK1Q8TC84 345 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 CYGBQ8WWM9 190 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 TM9SF4Q92544 642 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 EXTL1Q92935 676 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 DDIT4LQ96D03 193 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 ABHD17AQ96GS6 310 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 CRELD1Q96HD1 420 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 ADGRG7Q96K78 797 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 MUS81Q96NY9 551 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 TNFRSF13CQ96RJ3 184 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 GPX7Q96SL4 187 aaPredicted RBP7.42□□□□□ -1.22
USP4-210ENST00000483212 PIGQQ9BRB3 760 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 OR52D1Q9H346 318 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 ZDHHC11Q9H8X9 412 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 ACKR4Q9NPB9 350 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 B4GALT7Q9UBV7 327 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 SEC14L4Q9UDX3 406 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 ENOPH1Q9UHY7 261 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 ZNF229Q9UJW7 825 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 LRCH1Q9Y2L9 728 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 ZNF337Q9Y3M9 751 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 LIPGQ9Y5X9 500 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 ZZEF1O43149 2961 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 BSNQ9UPA5 3926 aa7.42□□□□□ -1.22
USP4-210ENST00000483212 CACNA1GO43497 2377 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 H3BML4 177 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 H3BN98 237 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 OR2T1O43869 369 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 HCN1O60741 890 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 AHSA1O95433 338 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SAGP10523 405 aaPredicted RBP7.41□□□□□ -1.22
USP4-210ENST00000483212 FKBP2P26885 142 aaKnown RBP7.41□□□□□ -1.22
USP4-210ENST00000483212 IDUAP35475 653 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 GIPRP48546 466 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 P2RY4P51582 365 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 CLDN15P56746 228 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 PPIAP62937 165 aaKnown RBP7.41□□□□□ -1.22
USP4-210ENST00000483212 PLGLB1Q02325 96 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 CD47Q08722 323 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 MYBPHQ13203 477 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 GINS1Q14691 196 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SGCBQ16585 318 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.41□□□□□ -1.22
USP4-210ENST00000483212 PGGHGQ32M88 737 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 ANKDD1AQ495B1 522 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 ZBED5Q49AG3 693 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 GXYLT1Q4G148 440 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SLC6A19Q695T7 634 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 ACSM5Q6NUN0 579 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 RPL13AP3Q6NVV1 102 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 RPUSD3Q6P087 351 aaKnown RBP7.41□□□□□ -1.22
USP4-210ENST00000483212 SMARCD3Q6STE5 483 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 UGT2A3Q6UWM9 527 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 NHLRC1Q6VVB1 395 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 OAFQ86UD1 273 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SIAH3Q8IW03 269 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 ENTHD1Q8IYW4 607 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SLC43A2Q8N370 569 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 ZNF555Q8NEP9 628 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 ATP6V1C2Q8NEY4 427 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 OR51A7Q8NH64 312 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 OR14L1PQ8NHC6 308 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 MOSPD2Q8NHP6 518 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 APH1BQ8WW43 257 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 OSTF1Q92882 214 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 UBE2FQ969M7 185 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 MIB2Q96AX9 1013 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 DNAJA3Q96EY1 480 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SAMD8Q96LT4 415 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 CNBD2Q96M20 576 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SFXN2Q96NB2 322 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 TAAR6Q96RI8 345 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 TSSK6Q9BXA6 273 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SLC6A15Q9H2J7 730 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 PRORYQ9H606 182 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 TMEM185BQ9H7F4 350 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 FANCFQ9NPI8 374 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 NANSQ9NR45 359 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SERINC1Q9NRX5 453 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 ZNF226Q9NYT6 803 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 TAS2R5Q9NYW4 299 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 IL20RAQ9UHF4 553 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 TP53TG5Q9Y2B4 290 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 HDGFL3Q9Y3E1 203 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 GMPPBQ9Y5P6 360 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 SPIN1Q9Y657 262 aaPredicted RBP7.41□□□□□ -1.22
USP4-210ENST00000483212 HSPE1-MOB4S4R3N1 261 aa7.41□□□□□ -1.22
USP4-210ENST00000483212 A0A0J9YW62 118 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 A0A1W2PNR3 127 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 ZNF814B7Z6K7 855 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 MCIDASD6RGH6 385 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 H0YC42 278 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 LINC01387J3KSC0 135 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 M0R082 166 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 M0R129 80 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 PLPP3O14495 311 aa7.4□□□□□ -1.22
USP4-210ENST00000483212 WBP4O75554 376 aaKnown RBP7.4□□□□□ -1.22
USP4-210ENST00000483212 TRAPPC6AO75865 159 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms