RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 ITCHQ96J02 903 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 TSNARE1Q96NA8 513 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 BIRC8Q96P09 236 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 ZNF300Q96RE9 604 aaPredicted RBP5.4□□□□□ -1.54
CHD6-209ENST00000482596 ATOH8Q96SQ7 321 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 RHOXF2Q9BQY4 288 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 NAT9Q9BTE0 207 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 ZNF416Q9BWM5 594 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 RTN4RQ9BZR6 473 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 OR10A5Q9H207 317 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 C20orf96Q9NUD7 363 aaPredicted RBP5.4□□□□□ -1.54
CHD6-209ENST00000482596 PAQR5Q9NXK6 330 aaPredicted RBP5.4□□□□□ -1.54
CHD6-209ENST00000482596 PPP4R1LQ9P1A2 415 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 CORO2BQ9UQ03 480 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 TMED5Q9Y3A6 229 aa5.4□□□□□ -1.54
CHD6-209ENST00000482596 TRIM49D1C9J1S8 452 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 NPIPB6E9PJ23 425 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 K7EPI3 171 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 RIPK2O43353 540 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 SCO2O43819 266 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 NOL3O60936 208 aaKnown RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 SCGB1D1O95968 90 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 ITGA5P08648 1049 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 MYF6P23409 242 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 IVDP26440 423 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 CHATP28329 748 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 SLC1A2P43004 574 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 ALDH3B1P43353 468 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 SEC61A1P61619 476 aaKnown RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 HTD2P86397 168 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 PAX8Q06710 450 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 STX5Q13190 355 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 CUL1Q13616 776 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 RCN2Q14257 317 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 CRYMQ14894 314 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 MAD2L1BPQ15013 274 aaPredicted RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 TSTQ16762 297 aaKnown RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 C2orf76Q3KRA6 126 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 TTLL9Q3SXZ7 439 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 HSP90AA5PQ58FG0 334 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 SPANXN3Q5MJ09 141 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 FCRLAQ7L513 359 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 DENND6AQ8IWF6 608 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 GSPT2Q8IYD1 628 aaKnown RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 TBC1D19Q8N5T2 526 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 GBP7Q8N8V2 638 aaPredicted RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 RNF138Q8WVD3 245 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 TFAP2CQ92754 450 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 UPRTQ96BW1 309 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 LRRC39Q96DD0 335 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 APIPQ96GX9 242 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 FAM71F1Q96KD3 344 aaPredicted RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 CITED2Q99967 270 aaPredicted RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 GAL3ST1Q99999 423 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 PSD2Q9BQI7 771 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 CDADC1Q9BWV3 514 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 ITPAQ9BY32 194 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 PAIP1Q9H074 479 aaKnown RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 C1orf21Q9H246 121 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 RABEP2Q9H5N1 569 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 TMEM165Q9HC07 324 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 SLC17A5Q9NRA2 495 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 FBXO6Q9NRD1 293 aaPredicted RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 IARS2Q9NSE4 1012 aaKnown RBP5.39□□□□□ -1.55
CHD6-209ENST00000482596 UBAP1Q9NZ09 502 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 FBLN5Q9UBX5 448 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 VDAC3Q9Y277 283 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 CACNG2Q9Y698 323 aa5.39□□□□□ -1.55
CHD6-209ENST00000482596 ARPC4-TTLL3A0A0A6YYG9 625 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 A0A0G2JPF8 293 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 CXorf49A8MYA2 514 aaPredicted RBP5.38□□□□□ -1.55
CHD6-209ENST00000482596 HNRNPCL3B7ZW38 293 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 SHOXO15266 292 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 FOXH1O75593 365 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 DEDDO75618 318 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 HAUS5O94927 633 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 SEC31AO94979 1220 aaKnown RBP5.38□□□□□ -1.55
CHD6-209ENST00000482596 ZNF205O95201 554 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 IGHMP01871 453 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 PABPC4LP0CB38 370 aaKnown RBP5.38□□□□□ -1.55
CHD6-209ENST00000482596 HNRNPCL4P0DMR1 293 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 VSIG10L2P0DP72 767 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 TMEM11P17152 192 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 CPN2P22792 545 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 GABRA5P31644 462 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 ELK3P41970 407 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 CENPAP49450 140 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 SCAND1P57086 179 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 CARD18P57730 90 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 CALCOCO2Q13137 446 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 HNRNPA0Q13151 305 aaKnown RBP5.38□□□□□ -1.55
CHD6-209ENST00000482596 PMS2P11Q13670 270 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 LARS2Q15031 903 aaKnown RBP5.38□□□□□ -1.55
CHD6-209ENST00000482596 TBRG1Q3YBR2 411 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 FBXW9Q5XUX1 488 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 AP1ARQ63HQ0 302 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 C18orf63Q68DL7 685 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 LRRC8EQ6NSJ5 796 aa5.38□□□□□ -1.55
CHD6-209ENST00000482596 UGT3A1Q6NUS8 523 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms