RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 GPAT4Q86UL3 456 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 RANBP3LQ86VV4 465 aaPredicted RBP10.1□□□□□ -0.79
CCM2-213ENST00000480658 SNX32Q86XE0 403 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 VRK2Q86Y07 508 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 KRTAP1-3Q8IUG1 177 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 ELOA3Q8NG57 546 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 OR9K2Q8NGE7 335 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 OR9I1Q8NGQ6 314 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 MFSD8Q8NHS3 518 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 RASSF5Q8WWW0 418 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 SLC38A4Q969I6 547 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 ADAD1Q96M93 576 aaKnown RBP10.1□□□□□ -0.79
CCM2-213ENST00000480658 HS6ST2Q96MM7 605 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 MUS81Q96NY9 551 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 TRIM2Q9C040 744 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 PAIP1Q9H074 479 aaKnown RBP10.1□□□□□ -0.79
CCM2-213ENST00000480658 CISD1Q9NZ45 108 aaKnown RBP10.1□□□□□ -0.79
CCM2-213ENST00000480658 LEF1Q9UJU2 399 aaPredicted RBP10.1□□□□□ -0.79
CCM2-213ENST00000480658 POU2F3Q9UKI9 436 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 RCE1Q9Y256 329 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 CORINQ9Y5Q5 1042 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 MED13LQ71F56 2210 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 OVOL3O00110 214 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 NR5A2O00482 541 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 FRS3O43559 492 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 ENTPD5O75356 428 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 BCAS1O75363 584 aaPredicted RBP10.09□□□□□ -0.79
CCM2-213ENST00000480658 ARAFP10398 606 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
CCM2-213ENST00000480658 CCNA2P20248 432 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 ACAA2P42765 397 aaKnown RBP10.09□□□□□ -0.79
CCM2-213ENST00000480658 DSCR9P59020 149 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 PRPS1P60891 318 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 CDK6Q00534 326 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 PLAURQ03405 335 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 CEACAM7Q14002 265 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 FAM69AQ5T7M9 428 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 ULK3Q6PHR2 472 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 DHRS4L2Q6PKH6 230 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 AAED1Q7RTV5 226 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 DTX2Q86UW9 622 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 CCDC36Q8IYA8 594 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 HIPK4Q8NE63 616 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 OR6S1Q8NH40 331 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 C3orf49Q96BT1 292 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 ZNF524Q96C55 264 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 AURKBQ96GD4 344 aaPredicted RBP10.09□□□□□ -0.79
CCM2-213ENST00000480658 KCNS3Q9BQ31 491 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 SLC6A13Q9NSD5 602 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 RLIMQ9NVW2 624 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 ADPRHL2Q9NX46 363 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.09□□□□□ -0.79
CCM2-213ENST00000480658 B3GALT5Q9Y2C3 310 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 C2CD3Q4AC94 2353 aa10.09□□□□□ -0.79
CCM2-213ENST00000480658 PCNX3Q9H6A9 2034 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 TMEM229AB2RXF0 380 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 PDLIM1O00151 329 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 AIM2O14862 343 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 ADAM11O75078 769 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 DANCRP0C864 163 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 GKN3PP0CG01 181 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 IMPDH2P12268 514 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 ZNF43P17038 809 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 GPX2P18283 190 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 CD40P25942 277 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 PPP2R2BQ00005 443 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 CHRNB3Q05901 458 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 MAPK11Q15759 364 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 GABRA6Q16445 453 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 C3orf36Q3SXR2 165 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 ALG10BQ5I7T1 473 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 INTS11Q5TA45 600 aaKnown RBP10.08□□□□□ -0.8
CCM2-213ENST00000480658 SLC2A7Q6PXP3 512 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 SLC22A25Q6T423 547 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 SEZ6L2Q6UXD5 910 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 ATG4DQ86TL0 474 aaPredicted RBP10.08□□□□□ -0.8
CCM2-213ENST00000480658 SERPINA11Q86U17 422 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 CCDC103Q8IW40 242 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 FBXL14Q8N1E6 418 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 SCAIQ8N9R8 606 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 C11orf65Q8NCR3 313 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 ADPRHL1Q8NDY3 354 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 SLC47A1Q96FL8 570 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 POM121Q96HA1 1249 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 SH3GL1Q99961 368 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 DHRS9Q9BPW9 319 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 LINC00470Q9BZP3 86 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 TMEM27Q9HBJ8 222 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 NDUFAF1Q9Y375 327 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 SLC25A15Q9Y619 301 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 NF1P21359 2839 aa10.08□□□□□ -0.8
CCM2-213ENST00000480658 ABCA4P78363 2273 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 MPDZO75970 2070 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 DPRXA6NFQ7 191 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 VSTM5A8MXK1 200 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 H7C1Q1 480 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 FMO6PO60774 539 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 FZD7O75084 574 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 NPIPB7O75200 414 aa10.07□□□□□ -0.8
CCM2-213ENST00000480658 AKR7A3O95154 331 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms