RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 IGHV3-9P01782 118 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 IL6P05231 212 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 DBIP07108 87 aaKnown RBP12.66□□□□□ -0.38
ATG4B-218ENST00000479554 IL7RP16871 459 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 GGT1P19440 569 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 POLR2HP52434 150 aaKnown RBP12.66□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF672Q499Z4 452 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-218ENST00000479554 TIMM23BQ5SRD1 257 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 FBXW9Q5XUX1 488 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 SSX8Q7RTT4 187 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 ADGRG3Q86Y34 549 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 LILRB1Q8NHL6 650 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-218ENST00000479554 PMM1Q92871 262 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 APH1AQ96BI3 265 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 DDIT4LQ96D03 193 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 CDRT15Q96T59 188 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-218ENST00000479554 MTHFD2LQ9H903 347 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-218ENST00000479554 TMEM181Q9P2C4 612 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 P2RX2Q9UBL9 471 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 TMED7Q9Y3B3 224 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 PRR14LQ5THK1 2151 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 CIB4A0PJX0 185 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 TMEM72A0PK05 275 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 DPRXA6NFQ7 191 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 FAAHO00519 579 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF208O43345 1280 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 ANP32DO95626 131 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 NPPAP01160 153 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 SOD3P08294 240 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 DANCRP0C864 163 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 SLC1A3P43003 542 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 MAGEA8P43361 318 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 SLC16A1P53985 500 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 SLC35A1P78382 337 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 EPS8Q12929 822 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 SNCBQ16143 134 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 MRPL2Q5T653 305 aaKnown RBP12.65□□□□□ -0.38
ATG4B-218ENST00000479554 C8orf82Q6P1X6 216 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-218ENST00000479554 RETREG3Q86VR2 466 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 P2RY8Q86VZ1 359 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 CCDC103Q8IW40 242 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 PEX5LQ8IYB4 626 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF433Q8N7K0 673 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-218ENST00000479554 SMAP2Q8WU79 429 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-218ENST00000479554 GTPBP3Q969Y2 492 aaKnown RBP12.65□□□□□ -0.38
ATG4B-218ENST00000479554 CALML5Q9NZT1 146 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 OSGIN1Q9UJX0 560 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 TRAPPC4Q9Y296 219 aa12.65□□□□□ -0.38
ATG4B-218ENST00000479554 MAGED1Q9Y5V3 778 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-218ENST00000479554 OR5H1A6NKK0 313 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 EIF1BO60739 113 aaKnown RBP12.64□□□□□ -0.39
ATG4B-218ENST00000479554 RAMP1O60894 148 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 MRPL33O75394 65 aaKnown RBP12.64□□□□□ -0.39
ATG4B-218ENST00000479554 RAD51DO75771 328 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 PDE5AO76074 875 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 PGM3O95394 542 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 ETFAP13804 333 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 TACR3P29371 465 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 CRATP43155 626 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 CDH11P55287 796 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 KPNB1Q14974 876 aaKnown RBP12.64□□□□□ -0.39
ATG4B-218ENST00000479554 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 C1orf146Q5VVC0 180 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 MSANTD1Q6ZTZ1 278 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 ZNF440Q8IYI8 595 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 DPP10Q8N608 796 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 VPS33AQ96AX1 596 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 TRMT61AQ96FX7 289 aaKnown RBP12.64□□□□□ -0.39
ATG4B-218ENST00000479554 NAA11Q9BSU3 229 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-218ENST00000479554 TRIM2Q9C040 744 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 RMND5AQ9H871 391 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 SPAG4Q9NPE6 437 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 SLC6A13Q9NSD5 602 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 ASB6Q9NWX5 421 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 TAS2R16Q9NYV7 291 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 ADA2Q9NZK5 511 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 NPAP1Q9NZP6 1156 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 SLC9A8Q9Y2E8 581 aa12.64□□□□□ -0.39
ATG4B-218ENST00000479554 OVOL3O00110 214 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 ABCD4O14678 606 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 BCHEP06276 602 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 IMPDH2P12268 514 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 CDKN1AP38936 164 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 MAP2K6P52564 334 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 MVDP53602 400 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 CRISP3P54108 245 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 DSTNP60981 165 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 ACTR3P61158 418 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 H3F3AP84243 136 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 FAPQ12884 760 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 NFYCQ13952 458 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 VEZF1Q14119 521 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 MAPK11Q15759 364 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 ETFDHQ16134 617 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 SPATS1Q496A3 300 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 SAMD4BQ5PRF9 694 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms