RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 PCNX1Q96RV3 2341 aa13.59□□□□□ -0.23
COL16A1-211ENST00000479100 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 ABCA12Q86UK0 2595 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 TRAV36DV7A0A075B6V5 113 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 LIPT2A6NK58 231 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 DVL2O14641 736 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 SMAD9O15198 467 aaKnown RBP13.58□□□□□ -0.24
COL16A1-211ENST00000479100 NPIPB7O75200 414 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 DIRAS1O95057 198 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 AKR7A3O95154 331 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 OPRM1P35372 400 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 RASGEF1BQ0VAM2 473 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 ST3GAL3Q11203 375 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 TRAP1Q12931 704 aaKnown RBP13.58□□□□□ -0.24
COL16A1-211ENST00000479100 SP5Q6BEB4 398 aaPredicted RBP13.58□□□□□ -0.24
COL16A1-211ENST00000479100 LCN8Q6JVE9 175 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 PGM2L1Q6PCE3 622 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 C5orf46Q6UWT4 87 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 NKAIN4Q8IVV8 208 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 CCDC103Q8IW40 242 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 SLC43A2Q8N370 569 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 MPP4Q96JB8 637 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 EPYCQ99645 322 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 TMEM43Q9BTV4 400 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 UCK2Q9BZX2 261 aa13.58□□□□□ -0.24
COL16A1-211ENST00000479100 A0A1W2PNV4 684 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 EEF1E1-BLOC1S5C9J1V9 151 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 EEF1E1O43324 174 aaKnown RBP13.57□□□□□ -0.24
COL16A1-211ENST00000479100 HNRNPRO43390 633 aaKnown RBP13.57□□□□□ -0.24
COL16A1-211ENST00000479100 DNPH1O43598 174 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 OR2T1O43869 369 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 EIF1BO60739 113 aaKnown RBP13.57□□□□□ -0.24
COL16A1-211ENST00000479100 CLDN14O95500 239 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 THRBP10828 461 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 AGAP20933 346 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 VLDLRP98155 873 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 TRAM2Q15035 370 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 RNPS1Q15287 305 aaKnown RBP13.57□□□□□ -0.24
COL16A1-211ENST00000479100 CDSNQ15517 529 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 OTUD3Q5T2D3 398 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-211ENST00000479100 LINC00114Q6XXX2 140 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 TMEM99Q8N816 258 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 LILRB4Q8NHJ6 448 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 MFSD8Q8NHS3 518 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 RNF128Q8TEB7 428 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 TMEM255BQ8WV15 326 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 ZNF775Q96BV0 537 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-211ENST00000479100 GMPPAQ96IJ6 420 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-211ENST00000479100 C7orf34Q96L11 122 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 PRSS27Q9BQR3 290 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 PTDSS2Q9BVG9 487 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 SFXN3Q9BWM7 321 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 LRMDAQ9H2I8 198 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 NDUFAF4Q9P032 175 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 ZNF629Q9UEG4 869 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-211ENST00000479100 EMC9Q9Y3B6 208 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 LRBAP50851 2863 aa13.57□□□□□ -0.24
COL16A1-211ENST00000479100 TCRBV5S2A0A599 114 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 NKX2-6A6NCS4 301 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 ZNF814B7Z6K7 855 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 ACOT8O14734 319 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 FFAR1O14842 300 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 CYTIPO60759 359 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 SMNDC1O75940 238 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL16A1-211ENST00000479100 FABP3P05413 133 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 CRHP06850 196 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 ITGA2P17301 1181 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
COL16A1-211ENST00000479100 GRPRP30550 384 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 IL1RL1Q01638 556 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 FLOT2Q14254 428 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 TMEM201Q5SNT2 666 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 FAM69AQ5T7M9 428 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 VWA1Q6PCB0 445 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 TSEN54Q7Z6J9 526 aaKnown RBP13.56□□□□□ -0.24
COL16A1-211ENST00000479100 SPATA24Q86W54 205 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 ZDHHC21Q8IVQ6 265 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 TUSC5Q8IXB3 177 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 OFCC1Q8IZS5 231 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 PIGXQ8TBF5 258 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 TMEM239Q8WW34 195 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 MARVELD3Q96A59 401 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 DOCK7Q96N67 2140 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 ZNF300Q96RE9 604 aaPredicted RBP13.56□□□□□ -0.24
COL16A1-211ENST00000479100 KCNJ16Q9NPI9 418 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 GLRX2Q9NS18 164 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 KLHL9Q9P2J3 617 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 POMPQ9Y244 141 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 KLF2Q9Y5W3 355 aaPredicted RBP13.56□□□□□ -0.24
COL16A1-211ENST00000479100 FBN2P35556 2912 aa13.56□□□□□ -0.24
COL16A1-211ENST00000479100 PRSS44E7EML9 344 aa13.55□□□□□ -0.24
COL16A1-211ENST00000479100 LRRN3E7EW58 273 aa13.55□□□□□ -0.24
COL16A1-211ENST00000479100 RAMP1O60894 148 aa13.55□□□□□ -0.24
COL16A1-211ENST00000479100 SS18L1O75177 396 aaPredicted RBP13.55□□□□□ -0.24
COL16A1-211ENST00000479100 CH25HO95992 272 aa13.55□□□□□ -0.24
COL16A1-211ENST00000479100 IL18BPO95998 194 aa13.55□□□□□ -0.24
COL16A1-211ENST00000479100 MT-ND1P03886 318 aa13.55□□□□□ -0.24
COL16A1-211ENST00000479100 SEMG1P04279 462 aa13.55□□□□□ -0.24
COL16A1-211ENST00000479100 H1F0P07305 194 aaKnown RBP13.55□□□□□ -0.24
COL16A1-211ENST00000479100 RHCEP18577 417 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms