RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CCSO14618 274 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 EMC8O43402 210 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 PPP1R3DO95685 299 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 CTNNB1P35222 781 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 CSNK1EP49674 416 aaKnown RBP19.57■□□□□ 0.72
SDF4-206ENST00000478938 NDUFAF6Q330K2 333 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 MEPCEQ7L2J0 689 aaKnown RBP19.57■□□□□ 0.72
SDF4-206ENST00000478938 ARL6IP6Q8N6S5 226 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 KISS1RQ969F8 398 aaPredicted RBP19.57■□□□□ 0.72
SDF4-206ENST00000478938 SEC22AQ96IW7 307 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 SOX7Q9BT81 388 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 EXO5Q9H790 373 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 MYNNQ9NPC7 610 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 RPS10P5Q9NQ39 176 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 MED17Q9NVC6 651 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 TCAPO15273 167 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 TMIGD3P0DMS9 266 aaPredicted RBP19.56■□□□□ 0.72
SDF4-206ENST00000478938 ST8SIA6P61647 398 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 FOXK2Q01167 660 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 PRRT3Q5FWE3 981 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 KRT77Q7Z794 578 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 CCDC54Q8NEL0 328 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 NEIL2Q969S2 332 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 RAB3CQ96E17 227 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 NECAB3Q96P71 396 aaPredicted RBP19.56■□□□□ 0.72
SDF4-206ENST00000478938 SEC61A2Q9H9S3 476 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 SEMA4GQ9NTN9 838 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 GFOD1Q9NXC2 390 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 BTBD17A6NE02 478 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 GGT3PA6NGU5 568 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 IFITM10A6NMD0 228 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 H3BNC9 293 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 SULT2B1O00204 365 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 TGM5O43548 720 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 PRICKLE3O43900 615 aaPredicted RBP19.56■□□□□ 0.72
SDF4-206ENST00000478938 CD160O95971 181 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 ACKR3P25106 362 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 IFNGR2P38484 337 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 SGSHP51688 502 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 PNLIPRP1P54315 467 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 TAS2R20P59543 309 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 ARF5P84085 180 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 ZNF85Q03923 595 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 PJVKQ0ZLH3 352 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 ILF3Q12906 894 aaKnown RBP eCLIP19.56■□□□□ 0.72
SDF4-206ENST00000478938 ACOT7LQ6ZUV0 252 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 TGIF2LXQ8IUE1 241 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 OR2T33Q8NG76 320 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 PIGXQ8TBF5 258 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 SLC39A7Q92504 469 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 MISP3Q96FF7 219 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 S100A16Q96FQ6 103 aaKnown RBP19.56■□□□□ 0.72
SDF4-206ENST00000478938 HRH4Q9H3N8 390 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 ST6GALNAC2Q9UJ37 374 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 FCF1Q9Y324 198 aaKnown RBP19.56■□□□□ 0.72
SDF4-206ENST00000478938 PLXND1Q9Y4D7 1925 aa19.56■□□□□ 0.72
SDF4-206ENST00000478938 PAPPA2Q9BXP8 1791 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 ARL6IP5O75915 188 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 ADH1CP00326 375 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 RHOCP08134 193 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 NR2F1P10589 423 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 HOXA6P31267 233 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 TAS2R43P59537 309 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 ZNF234Q14588 700 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 LYPLAL1Q5VWZ2 237 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 OR10K2Q6IF99 312 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 ZNF620Q6ZNG0 422 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 TMED6Q8WW62 240 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 C3orf49Q96BT1 292 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 ARMC5Q96C12 935 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 OCSTAMPQ9BR26 566 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 POFUT1Q9H488 388 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 NTNG1Q9Y2I2 539 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 ARL5CA6NH57 179 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 CD8AP01732 235 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 ATP1B3P54709 279 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 MANFP55145 182 aaKnown RBP19.55■□□□□ 0.72
SDF4-206ENST00000478938 ZNF280AP59817 542 aaPredicted RBP19.55■□□□□ 0.72
SDF4-206ENST00000478938 MST1LQ2TV78 715 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 TP53I3Q53FA7 332 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 AGTRAPQ6RW13 159 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 GID4Q8IVV7 300 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 OR51V1Q9H2C8 321 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 RHOFQ9HBH0 211 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 CA14Q9ULX7 337 aa19.55■□□□□ 0.72
SDF4-206ENST00000478938 MEIS3P1A6NDR6 274 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 IFITM5A6NNB3 132 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 RAB5AP20339 215 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 RAB5CP51148 216 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 CNTN1Q12860 1018 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 ADAM5Q6NVV9 412 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 GAREM2Q75VX8 874 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 LMNTD1Q8N9Z9 388 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 OR6N1Q8NGY5 312 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 NRIP3Q9NQ35 241 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 TRPC4Q9UBN4 977 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 LHX3Q9UBR4 397 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 TMEM72A0PK05 275 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 IGLV3-27P01718 113 aa19.54■□□□□ 0.72
SDF4-206ENST00000478938 SMIM10L2AP0DMW4 78 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms