RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PRR31Q5SQ13 230 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 AP1ARQ63HQ0 302 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 KANK2Q63ZY3 851 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 HOMEZQ8IX15 550 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 CNPY4Q8N129 248 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 FAM169BQ8N8A8 192 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 MZB1Q8WU39 189 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 CKAP2Q8WWK9 683 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 OIT3Q8WWZ8 545 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 PPP3R2Q96LZ3 170 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 ZNF317Q96PQ6 595 aaPredicted RBP14.85□□□□□ -0.03
VIM-204ENST00000478746 LRRC37BQ96QE4 947 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 PIF1Q9H611 641 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 SEC61A2Q9H9S3 476 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 MOV10Q9HCE1 1003 aaKnown RBP14.85□□□□□ -0.03
VIM-204ENST00000478746 EXOSC3Q9NQT5 275 aaKnown RBP14.85□□□□□ -0.03
VIM-204ENST00000478746 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.85□□□□□ -0.03
VIM-204ENST00000478746 GIMAP2Q9UG22 337 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 OSGIN1Q9UJX0 560 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 USP22Q9UPT9 525 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 WDR45Q9Y484 360 aa14.85□□□□□ -0.03
VIM-204ENST00000478746 A0A096LPE4 126 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 A0A1W2PPZ6 126 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 PEX11AO75192 247 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 AKR7A3O95154 331 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 MSMBP08118 114 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 IGFBP1P08833 259 aaPredicted RBP14.84□□□□□ -0.03
VIM-204ENST00000478746 HOXB1P14653 301 aaPredicted RBP14.84□□□□□ -0.03
VIM-204ENST00000478746 LIMS1P48059 325 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 CCT5P48643 541 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 CEACAM7Q14002 265 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 FAM153CQ494X1 144 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 ATAD3BQ5T9A4 648 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 TMEM225Q6GV28 225 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 TYW3Q6IPR3 259 aaKnown RBP14.84□□□□□ -0.03
VIM-204ENST00000478746 FAHD2BQ6P2I3 314 aaPredicted RBP14.84□□□□□ -0.03
VIM-204ENST00000478746 GPAT4Q86UL3 456 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 CDK20Q8IZL9 346 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 CLEC4FQ8N1N0 589 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 KRTCAP2Q8N6L1 136 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 CLDND2Q8NHS1 167 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 MAGEE2Q8TD90 523 aaPredicted RBP14.84□□□□□ -0.03
VIM-204ENST00000478746 XAGE5Q8WWM1 108 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 ZG16BQ96DA0 208 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 FAHD2AQ96GK7 314 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 SLC35G5Q96KT7 338 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 DUSP26Q9BV47 211 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 OR51I1Q9H343 314 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 TPK1Q9H3S4 243 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 NARFLQ9H6Q4 476 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 POLE3Q9NRF9 147 aa14.84□□□□□ -0.03
VIM-204ENST00000478746 ZC3H12DA2A288 527 aaKnown RBP14.83□□□□□ -0.04
VIM-204ENST00000478746 OR6C65A6NJZ3 312 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 AGR2O95994 175 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 GPIP06744 558 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 GUSBP08236 651 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 OR12D1P0DN82 309 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 PRPS1L1P21108 318 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 EPHA1P21709 976 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 TACR3P29371 465 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 GPR6P46095 362 aaPredicted RBP14.83□□□□□ -0.04
VIM-204ENST00000478746 MAP2K6P52564 334 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 ARFIP2P53365 341 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 AWAT1Q58HT5 328 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 LSRQ86X29 649 aaPredicted RBP14.83□□□□□ -0.04
VIM-204ENST00000478746 TWIST2Q8WVJ9 160 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 ZNF696Q9H7X3 374 aa14.83□□□□□ -0.04
VIM-204ENST00000478746 CLDN24A6NM45 220 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 AP3D1O14617 1153 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 PIP5K1BO14986 540 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 TMPRSS2O15393 492 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 IGKV3-15P01624 115 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 TFP02787 698 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 FGF4P08620 206 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 CELA3BP08861 270 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 CBR1P16152 277 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 SELENOPP49908 381 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 DEFA6Q01524 100 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 OR7A5Q15622 319 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 PGS1Q32NB8 556 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 UGT3A2Q3SY77 523 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 IL23RQ5VWK5 629 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 HMGN2P46Q86SG4 172 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 C10orf107Q8IVU9 208 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 TEX29Q8N6K0 151 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 OR51F2Q8NH61 342 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 CNOT9Q92600 299 aaKnown RBP14.82□□□□□ -0.04
VIM-204ENST00000478746 ROPN1LQ96C74 230 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 ALKBH3Q96Q83 286 aaPredicted RBP14.82□□□□□ -0.04
VIM-204ENST00000478746 C1orf50Q9BV19 199 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 GATA5Q9BWX5 397 aaPredicted RBP14.82□□□□□ -0.04
VIM-204ENST00000478746 TREM2Q9NZC2 230 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 CMAHPQ9Y471 501 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 PCDHGB1Q9Y5G3 927 aa14.82□□□□□ -0.04
VIM-204ENST00000478746 IGHV2OR16-5A0A0B4J2B6 119 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 RNF103-CHMP3A0A140T963 221 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 LIPT2A6NK58 231 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 AQP7P3A6NL99 342 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 TMEM233B4DJY2 109 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 SCN2BO60939 215 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms