RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 OR4M1Q8NGD0 313 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 OR4C3Q8NH37 302 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 NPRL2Q8WTW4 380 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 DEDD2Q8WXF8 326 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 BCL2L14Q9BZR8 327 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 FOXQ1Q9C009 403 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 SEMA6CQ9H3T2 930 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF304Q9HCX3 659 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 ASB6Q9NWX5 421 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 MGAT4CQ9UBM8 478 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 MGAT4AQ9UM21 535 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 NOP16Q9Y3C1 178 aaKnown RBP10.17□□□□□ -0.78
COL27A1-204ENST00000477421 WDR87Q6ZQQ6 2873 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 CDC42EP2O14613 210 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 CD1CP29017 333 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 SSTR2P30874 369 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 TSFMP43897 325 aaKnown RBP10.17□□□□□ -0.78
COL27A1-204ENST00000477421 HMGA2P52926 109 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 NKPD1Q17RQ9 610 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 ARHGAP11BQ3KRB8 267 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 DNM1P34Q6PK57 102 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 KCTD9Q7L273 389 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 RNF113BQ8IZP6 322 aaKnown RBP10.17□□□□□ -0.78
COL27A1-204ENST00000477421 C16orf52Q8NHV5 167 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 TSLPQ969D9 159 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 OR2A14Q96R47 310 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 WDR77Q9BQA1 342 aaPredicted RBP10.17□□□□□ -0.78
COL27A1-204ENST00000477421 NOX4Q9NPH5 578 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 FKBP14Q9NWM8 211 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 COQ3Q9NZJ6 369 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 EPHA6Q9UF33 1036 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 CACNG2Q9Y698 323 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 C13orf42A0A1B0GVH6 325 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 TMEM129A0AVI4 362 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PRAMEF25A6NGN4 478 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 CTNSO60931 367 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 CCNOP22674 350 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 CD79BP40259 229 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 OR3A3P47888 321 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 OR3A2P47893 321 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 FNTBP49356 437 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 IFITM3Q01628 133 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 TLE3Q04726 772 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ARTNQ5T4W7 220 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 VASNQ6EMK4 673 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PEG10Q86TG7 708 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 RDH10Q8IZV5 341 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SETD6Q8TBK2 473 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PELOQ9BRX2 385 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 CRB3Q9BUF7 120 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ZMAT3Q9HA38 289 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 FAM60AQ9NP50 221 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF337Q9Y3M9 751 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PCDHGA3Q9Y5H0 932 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 NOTOA8MTQ0 251 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 C9J4A7 227 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 MEN1O00255 615 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PIPP12273 146 aaPredicted RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 LCN1P31025 176 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 HNRNPFP52597 415 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 RIDAP52758 137 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 KIAA1024LP59773 190 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 E2F1Q01094 437 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SGCBQ16585 318 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 TMEM164Q5U3C3 297 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 MARCH3Q86UD3 253 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF595Q8IYB9 648 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF440Q8IYI8 595 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SIRT6Q8N6T7 355 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF283Q8N7M2 679 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 FAM174AQ8TBP5 190 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 LGALS14Q8TCE9 139 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 GCDHQ92947 438 aaPredicted RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 TMEM106AQ96A25 262 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 TCTN2Q96GX1 697 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 OR2A5Q96R48 311 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ACOXLQ9NUZ1 547 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 MMP17Q9ULZ9 603 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ALG5Q9Y673 324 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 CXorf51AA0A1B0GTR3 108 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 TRDV1A0A1B0GX56 115 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 TNFRSF10CO14798 259 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 CHP2O43745 196 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ELK1P19419 428 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 EMDP50402 254 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 CCR6P51684 374 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SF3A2Q15428 464 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PRAMEF8Q5VWM4 474 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PRAMEF7Q5VXH5 474 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SLC6A19Q695T7 634 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 LRRN1Q6UXK5 716 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 LRRC28Q86X40 367 aaPredicted RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 TRPV4Q9HBA0 871 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 VSTM2BA6NLU5 285 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 ARPC1BO15143 372 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SURF4O15260 269 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 SEC14L5O43304 696 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 GATBO75879 557 aaKnown RBP10.16□□□□□ -0.78
COL27A1-204ENST00000477421 KDM4BO94953 1096 aa10.16□□□□□ -0.78
COL27A1-204ENST00000477421 PNMTP11086 282 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms