RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ACVR1BP36896 505 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 PITPNBP48739 271 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 CLDN20P56880 219 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 HSF2Q03933 536 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 MADCAM1Q13477 382 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 IL10RAQ13651 578 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 RPL22L1Q6P5R6 122 aaKnown RBP15.05■□□□□ 0
TMEM53-208ENST00000476724 UBE2J2Q8N2K1 259 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 SDR16C5Q8N3Y7 309 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 ZNF527Q8NB42 609 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 OR5J2Q8NH18 312 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 OR51Q1Q8NH59 317 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 ZMYND19Q96E35 227 aaPredicted RBP15.05■□□□□ 0
TMEM53-208ENST00000476724 TGM7Q96PF1 710 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 MARVELD1Q9BSK0 173 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 MARCH7Q9H992 704 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 PDE7BQ9NP56 450 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 NRIP3Q9NQ35 241 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 RASD1Q9Y272 281 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 RBMX2Q9Y388 322 aaKnown RBP15.05■□□□□ 0
TMEM53-208ENST00000476724 ADAMTS9Q9P2N4 1935 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 LAMTOR5O43504 91 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 SLC43A1O75387 559 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 MAOAP21397 527 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 SIRPAP78324 504 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 SF3B4Q15427 424 aaKnown RBP eCLIP15.05■□□□□ -0
TMEM53-208ENST00000476724 WBP2NLQ6ICG8 309 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 SSX6Q7RTT6 188 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 SLC35F2Q8IXU6 374 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 SLC35F3Q8IY50 421 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 THAP4Q8WY91 577 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 PHYHIPQ92561 330 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 EDAQ92838 391 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 C3orf49Q96BT1 292 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 SMIM19Q96E16 107 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 GPX7Q96SL4 187 aaPredicted RBP15.05■□□□□ -0
TMEM53-208ENST00000476724 ELF4Q99607 663 aaPredicted RBP15.05■□□□□ -0
TMEM53-208ENST00000476724 UBQLN4Q9NRR5 601 aa15.05■□□□□ -0
TMEM53-208ENST00000476724 NUFIP1Q9UHK0 495 aaKnown RBP15.05■□□□□ -0
TMEM53-208ENST00000476724 IGHV5-51A0A0C4DH38 117 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 A0A0G2JK05 382 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 FITM1A5D6W6 292 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 TLCD2A6NGC4 264 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 RHPN2P1A8MT19 583 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 ORC5O43913 435 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 TFP02787 698 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 ALAS2P22557 587 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 OR1D5P58170 312 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 RPS4XP62701 263 aaKnown RBP15.04■□□□□ -0
TMEM53-208ENST00000476724 MRPS15P82914 257 aaKnown RBP15.04■□□□□ -0
TMEM53-208ENST00000476724 GRM7Q14831 915 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 CDK5R1Q15078 307 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 ZNF57Q68EA5 555 aaPredicted RBP15.04■□□□□ -0
TMEM53-208ENST00000476724 PYHIN1Q6K0P9 492 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 SAMD12Q8N8I0 201 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 NPEPL1Q8NDH3 523 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 FAM71CQ8NEG0 241 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 C7orf57Q8NEG2 295 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 SNX33Q8WV41 574 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 LIPHQ8WWY8 451 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 DDOQ99489 341 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 ZCCHC4Q9H5U6 513 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 ABRACLQ9P1F3 81 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 A0A0G2JMP0 313 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 A0A0X1KG70 313 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 GNB5O14775 395 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 GRK6P43250 576 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 TATDN3Q17R31 274 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 TP53I3Q53FA7 332 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 FAM27D1Q5T7N8 215 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 TIGD3Q6B0B8 471 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 RPTNQ6XPR3 784 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 MED25Q71SY5 747 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 LRRC17Q8N6Y2 441 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 OR4M2Q8NGB6 313 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 OR4M1Q8NGD0 313 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 UBASH3BQ8TF42 649 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 RFT1Q96AA3 541 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 PELI1Q96FA3 418 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 THAP7Q9BT49 309 aaPredicted RBP15.04■□□□□ -0
TMEM53-208ENST00000476724 NMNAT2Q9BZQ4 307 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 RAB33BQ9H082 229 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 HDHD2Q9H0R4 259 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 EXOSC3Q9NQT5 275 aaKnown RBP15.04■□□□□ -0
TMEM53-208ENST00000476724 SOHLH2Q9NX45 425 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 NLKQ9UBE8 527 aa15.04■□□□□ -0
TMEM53-208ENST00000476724 ZDBF2Q9HCK1 2354 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 RP1P56715 2156 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 A0A0B4J293 547 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 ANKRD61A6NGH8 418 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 ELOA3DA6NLF2 546 aaPredicted RBP15.03■□□□□ -0
TMEM53-208ENST00000476724 NOTOA8MTQ0 251 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 CLPSP04118 112 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 EIF4EP06730 217 aaKnown RBP15.03■□□□□ -0
TMEM53-208ENST00000476724 YES1P07947 543 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 APEHP13798 732 aaKnown RBP15.03■□□□□ -0
TMEM53-208ENST00000476724 HPGDP15428 266 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 CD1CP29017 333 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 PPICP45877 212 aa15.03■□□□□ -0
TMEM53-208ENST00000476724 GDI2P50395 445 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms