RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ARAFP10398 606 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 TGFBR3Q03167 851 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 TMEM115Q12893 351 aaPredicted RBP10.76□□□□□ -0.69
U2AF1-209ENST00000475639 SLC10A1Q14973 349 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 HES5Q5TA89 166 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 SERPINA12Q8IW75 414 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 CMTM8Q8IZV2 173 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 FAM58AQ8N1B3 248 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 CELF5Q8N6W0 485 aaKnown RBP10.76□□□□□ -0.69
U2AF1-209ENST00000475639 OR8D4Q8NGM9 314 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 SOSTQ9BQB4 213 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 TMEM43Q9BTV4 400 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 HCAR1Q9BXC0 346 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 OR51J1Q9H342 316 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 GPR160Q9UJ42 338 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 NUBP2Q9Y5Y2 271 aa10.76□□□□□ -0.69
U2AF1-209ENST00000475639 A8MVM7 634 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 CSO75390 466 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 RABGGTBP53611 331 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ELOCQ15369 112 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 C4orf17Q53FE4 359 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 FAM69AQ5T7M9 428 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 RBMS3Q6XE24 437 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 C17orf107Q6ZR85 190 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 MOB1BQ7L9L4 216 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 PDZD3Q86UT5 571 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 LRRC25Q8N386 305 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 SLC5A8Q8N695 610 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 CLDN22Q8N7P3 220 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 THAP3Q8WTV1 239 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 DIO2Q92813 273 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 NIPSNAP1Q9BPW8 284 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 SORBS1Q9BX66 1292 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 GHITMQ9H3K2 345 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 POPDC3Q9HBV1 291 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ACTR10Q9NZ32 417 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 B4GALT6Q9UBX8 382 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 IGKV6-21A0A0C4DH24 114 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 AGAP14A8MT82 685 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 FBXO45P0C2W1 286 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 DRD2P14416 443 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 GRPRP30550 384 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ETFDHQ16134 617 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF791Q3KP31 576 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 TIGD5Q53EQ6 642 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 CNIH2Q6PI25 160 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF705AQ6ZN79 300 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 OVCH2Q7RTZ1 564 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 LRFN5Q96NI6 719 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ZIC5Q96T25 663 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 RBM24Q9BX46 236 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 NT5DC2Q9H857 520 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ARNT2Q9HBZ2 717 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 EMC7Q9NPA0 242 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 SLAMF7Q9NQ25 335 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 NDUFB11Q9NX14 153 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 PCDHB10Q9UN67 800 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 PCDHGA9Q9Y5G4 932 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 RFXAPO00287 272 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 TNFSF12O43508 249 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 NDUFB2O95178 105 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 HBQ1P09105 142 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 PRSS56P0CW18 603 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 TNFSF4P23510 183 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 IL2RGP31785 369 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 HOXA1P49639 335 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 FLI1Q01543 452 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 SF3A2Q15428 464 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 MICAQ29983 383 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 METAP1DQ6UB28 335 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 CTU1Q7Z7A3 348 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 BAGE3Q86Y29 109 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 BAGE2Q86Y30 109 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 SPATA6Q9NWH7 488 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF646O15015 1829 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ASCC3Q8N3C0 2202 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 OR2T1O43869 369 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 AKAIN1P0CW23 69 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 MGST1P10620 155 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ELNP15502 786 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 CRABP1P29762 137 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 MZT1Q08AG7 82 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 UPP1Q16831 310 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ATRAIDQ6UW56 229 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 PAQR8Q8TEZ7 354 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ZBTB8AQ96BR9 441 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 FOXRED1Q96CU9 486 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 ARHGAP39Q9C0H5 1083 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 HRH4Q9H3N8 390 aa10.75□□□□□ -0.69
U2AF1-209ENST00000475639 CNOT2Q9NZN8 540 aaKnown RBP10.75□□□□□ -0.69
U2AF1-209ENST00000475639 COL16A1Q07092 1604 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 A0A087WZY1 265 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 GJE1A6NN92 205 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 FAM227AF5H4B4 570 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 LGALS8O00214 317 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF44P15621 663 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 STK19P49842 368 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 PHYHD1Q5SRE7 291 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 PLBD1Q6P4A8 553 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms