RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RBM45Q8IUH3 476 aaKnown RBP14.06□□□□□ -0.16
CPSF3-203ENST00000475482 OR10G2Q8NGC3 310 aa14.06□□□□□ -0.16
CPSF3-203ENST00000475482 PHOSPHO1Q8TCT1 267 aa14.06□□□□□ -0.16
CPSF3-203ENST00000475482 TRIB1Q96RU8 372 aa14.06□□□□□ -0.16
CPSF3-203ENST00000475482 TUBA1CQ9BQE3 449 aa14.06□□□□□ -0.16
CPSF3-203ENST00000475482 DNAJB12Q9NXW2 375 aaKnown RBP14.06□□□□□ -0.16
CPSF3-203ENST00000475482 RHCGQ9UBD6 479 aa14.06□□□□□ -0.16
CPSF3-203ENST00000475482 RPS6KB2Q9UBS0 482 aa14.06□□□□□ -0.16
CPSF3-203ENST00000475482 F8P00451 2351 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 TEP1Q99973 2627 aaKnown RBP14.05□□□□□ -0.16
CPSF3-203ENST00000475482 CENPVL1A0A0U1RR11 272 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 CLDN24A6NM45 220 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 CPSF4LA6NMK7 179 aaKnown RBP14.05□□□□□ -0.16
CPSF3-203ENST00000475482 ALG1L2C9J202 215 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 FFAR1O14842 300 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 ZNF264O43296 627 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 HCRTR2O43614 444 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 NDUFB5O43674 189 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 EIF4E2O60573 245 aaKnown RBP14.05□□□□□ -0.16
CPSF3-203ENST00000475482 CYP7B1O75881 506 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 UBTFL6P0CB48 400 aaPredicted RBP14.05□□□□□ -0.16
CPSF3-203ENST00000475482 IGFBP5P24593 272 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 PEX19P40855 299 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 STARP49675 285 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 ASCL1P50553 236 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 PPP1R8Q12972 351 aaKnown RBP14.05□□□□□ -0.16
CPSF3-203ENST00000475482 MED21Q13503 144 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 TBPL2Q6SJ96 375 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 ARSKQ6UWY0 536 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 DHRSXQ8N5I4 330 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 C9orf106Q8NAJ2 232 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 ZNF555Q8NEP9 628 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 ADAMTS16Q8TE57 1224 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 CNOT9Q92600 299 aaKnown RBP14.05□□□□□ -0.16
CPSF3-203ENST00000475482 WNT2BQ93097 391 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 SFXN2Q96NB2 322 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 ZFP3Q96NJ6 502 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 DSN1Q9H410 356 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 SDHAF3Q9NRP4 125 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 KRT84Q9NSB2 600 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 PPP4R1LQ9P1A2 415 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 CLCF1Q9UBD9 225 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 MGAT4BQ9UQ53 548 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 POFUT2Q9Y2G5 429 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 AKAP9Q99996 3911 aa14.05□□□□□ -0.16
CPSF3-203ENST00000475482 FAM221AA4D161 298 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 H0YAE9 185 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 FRS3O43559 492 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 DENRO43583 198 aaKnown RBP14.04□□□□□ -0.16
CPSF3-203ENST00000475482 SCO2O43819 266 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 RCBTB2O95199 551 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 BMP5P22003 454 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 CTSSP25774 331 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 MERTKQ12866 999 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 OR1Q1Q15612 314 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 TMEM44Q2T9K0 475 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 GLYR1Q49A26 553 aaPredicted RBP14.04□□□□□ -0.16
CPSF3-203ENST00000475482 SWT1Q5T5J6 900 aaKnown RBP14.04□□□□□ -0.16
CPSF3-203ENST00000475482 TTC23Q5W5X9 447 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 KDM4DQ6B0I6 523 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 FAHD1Q6P587 224 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 MARCH3Q86UD3 253 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 LSMEM1Q8N8F7 131 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 FAM71CQ8NEG0 241 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 OR4K17Q8NGC6 315 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 DUSP19Q8WTR2 217 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 RNASE6Q93091 150 aaKnown RBP14.04□□□□□ -0.16
CPSF3-203ENST00000475482 SLC41A3Q96GZ6 507 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 LAT2Q9GZY6 243 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 SMURF2Q9HAU4 748 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 MED11Q9P086 117 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 FOXD3Q9UJU5 478 aaPredicted RBP14.04□□□□□ -0.16
CPSF3-203ENST00000475482 DKKL1Q9UK85 242 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 AP4B1Q9Y6B7 739 aa14.04□□□□□ -0.16
CPSF3-203ENST00000475482 SH3PXD2BA1X283 911 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 C7orf72A4D263 438 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 CLCA1A8K7I4 914 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 LINC01387J3KSC0 135 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 OR10H3O60404 316 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 ADAP00813 363 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 LINGO3P0C6S8 592 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 GKN3PP0CG01 181 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 PRKACGP22612 351 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 OPRM1P35372 400 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 CAPGP40121 348 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 RPS6KA3P51812 740 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 CLDN15P56746 228 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 C17orf67Q0P5P2 114 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 HS3ST5Q8IZT8 346 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 TMCO5AQ8N6Q1 288 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 DNAJA4Q8WW22 397 aaPredicted RBP14.03□□□□□ -0.16
CPSF3-203ENST00000475482 ACOT11Q8WXI4 607 aaPredicted RBP14.03□□□□□ -0.16
CPSF3-203ENST00000475482 C1GALT1C1Q96EU7 318 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 MPP4Q96JB8 637 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 HS6ST2Q96MM7 605 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 FEVQ99581 238 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 TM9SF2Q99805 663 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 WFDC6Q9BQY6 131 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 ADI1Q9BV57 179 aa14.03□□□□□ -0.16
CPSF3-203ENST00000475482 PAPOLBQ9NRJ5 636 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms