RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 GTPBP8Q8N3Z3 284 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TMCO5AQ8N6Q1 288 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 SIRT6Q8N6T7 355 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CLEC1AQ8NC01 280 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 MDS2Q8NDY4 140 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TSPAN14Q8NG11 270 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 OR5M3Q8NGP4 307 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 OR13C2Q8NGS9 318 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 MFSD8Q8NHS3 518 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CNIH3Q8TBE1 160 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 FAM81AQ8TBF8 368 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TEX47Q8TBZ9 253 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TMEM163Q8TC26 289 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 IPCEF1Q8WWN9 437 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 HAS2Q92819 552 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TAAR8Q969N4 342 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 KTI12Q96EK9 354 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 SAMD8Q96LT4 415 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 Q96MT0 163 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TNFRSF13CQ96RJ3 184 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 NPAS1Q99742 590 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TSSK6Q9BXA6 273 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ING2Q9H160 280 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 PTGES2Q9H7Z7 377 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 NRIP3Q9NQ35 241 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CMC2Q9NRP2 79 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 SACM1LQ9NTJ5 587 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 PAK1IP1Q9NWT1 392 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 STMN3Q9NZ72 180 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CNOT2Q9NZN8 540 aaKnown RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 PPP4R1LQ9P1A2 415 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CHRNA9Q9UGM1 479 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 FBXL2Q9UKC9 423 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 BLOC1S6Q9UL45 172 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TPRKBQ9Y3C4 175 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF337Q9Y3M9 751 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ZFHX4Q86UP3 3567 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 FRYQ5TBA9 3013 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 LOC102725191A0A1B0GVB3 256 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 ZC3H12DA2A288 527 aaKnown RBP5.97□□□□□ -1.45
ATG4A-207ENST00000474825 LRRC3CA6NJW4 275 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 CLCA1A8K7I4 914 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF891A8MT65 544 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-207ENST00000474825 LRRN3E7EW58 273 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SUSD5O60279 629 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 NDUFB2O95178 105 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 WDPCPO95876 746 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 CH25HO95992 272 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 CLPTM1O96005 669 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 POU1F1P28069 291 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SRD5A2P31213 254 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SLC6A6P31641 620 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 IDUAP35475 653 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 RPL5P46777 297 aaKnown RBP5.97□□□□□ -1.45
ATG4A-207ENST00000474825 NR1H2P55055 460 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 B3GALT5-AS1P59052 145 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 FOXF1Q12946 379 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 FOXD4Q12950 439 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-207ENST00000474825 MFAP5Q13361 173 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 TMED1Q13445 227 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 IRF3Q14653 427 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 MFSD13AQ14CX5 517 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SGCBQ16585 318 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SYT14P1Q58G82 188 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 ABHD17BQ5VST6 288 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 C1orf140Q5VVS0 124 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 C1QL3Q5VWW1 255 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 OR5M10Q6IEU7 315 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 ISLR2Q6UXK2 745 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 PTCHD4Q6ZW05 846 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 FAM122BQ7Z309 247 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 VASH2Q86V25 355 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 P3H2Q8IVL5 708 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SPARTQ8N0X7 666 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 GALNT16Q8N428 558 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 IQCF1Q8N6M8 205 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 LRRC17Q8N6Y2 441 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SCAIQ8N9R8 606 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 PSD4Q8NDX1 1056 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 ADPRHL1Q8NDY3 354 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 FANK1Q8TC84 345 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SLC25A43Q8WUT9 341 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SCMH1Q96GD3 660 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 MOGAT1Q96PD6 335 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SLC38A2Q96QD8 506 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 UTP23Q9BRU9 249 aaKnown RBP5.97□□□□□ -1.45
ATG4A-207ENST00000474825 PRRG3Q9BZD7 231 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 OR2B2Q9GZK3 357 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF552Q9H707 407 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-207ENST00000474825 CCNB1IP1Q9NPC3 277 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 TIMMDC1Q9NPL8 285 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 DEPPQ9NTK1 212 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 IMPAD1Q9NX62 359 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SCN3BQ9NY72 215 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 MRPL39Q9NYK5 338 aaKnown RBP5.97□□□□□ -1.45
ATG4A-207ENST00000474825 LRFN1Q9P244 771 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 ABI3Q9P2A4 366 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 POLHQ9Y253 713 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 TRAPPC4Q9Y296 219 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 SLC6A5Q9Y345 797 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms