RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TEX15Q9BXT5 2789 aa12.61□□□□□ -0.39
VAMP4-203ENST00000474047 FAM220BPB1ANY3 271 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 ZNF814B7Z6K7 855 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 GSTA4O15217 222 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 OR2T1O43869 369 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 RAMP1O60894 148 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 IGHV3-9P01782 118 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 PSMB1P20618 241 aaKnown RBP12.6□□□□□ -0.39
VAMP4-203ENST00000474047 CD247P20963 164 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 NUDT2P50583 147 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 IL1RL1Q01638 556 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 ITGADQ13349 1161 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 SFRP5Q5T4F7 317 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 C6orf89Q6UWU4 347 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 Q6ZT83 130 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 TREML1Q86YW5 311 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 WFDC8Q8IUA0 241 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 GABRG1Q8N1C3 465 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 C10orf53Q8N6V4 93 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 MFSD8Q8NHS3 518 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 PIK3IP1Q96FE7 263 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 EPYCQ99645 322 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 ARHGDIGQ99819 225 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 SF3B5Q9BWJ5 86 aaKnown RBP12.6□□□□□ -0.39
VAMP4-203ENST00000474047 UPB1Q9UBR1 384 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 DCHS2Q6V1P9 2916 aa12.6□□□□□ -0.39
VAMP4-203ENST00000474047 ELOVL7A1L3X0 281 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 FAM221AA4D161 298 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 AQP7P3A6NL99 342 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 CPSF4LA6NMK7 179 aaKnown RBP12.59□□□□□ -0.39
VAMP4-203ENST00000474047 ENO4A6NNW6 628 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 FMO6PO60774 539 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 CRYGSP22914 178 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 TSC22D1Q15714 1073 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 NRF1Q16656 503 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 LRRC23Q53EV4 343 aaPredicted RBP12.59□□□□□ -0.39
VAMP4-203ENST00000474047 ENTPD8Q5MY95 495 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 FBXW9Q5XUX1 488 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 BHLHA15Q7RTS1 189 aaPredicted RBP12.59□□□□□ -0.39
VAMP4-203ENST00000474047 P3H2Q8IVL5 708 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 MICU2Q8IYU8 434 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 GPR32P1Q8NGA4 272 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 NRGNQ92686 78 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 S100PBPQ96BU1 408 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 KTI12Q96EK9 354 aaPredicted RBP12.59□□□□□ -0.39
VAMP4-203ENST00000474047 OR10A4Q9H209 315 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 USP22Q9UPT9 525 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 ARL2BPQ9Y2Y0 163 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 SH3GLB1Q9Y371 365 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 FLVCR1Q9Y5Y0 555 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 TRAV36DV7A0A075B6V5 113 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 A0A087WUJ7 227 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 A0A0B4J2E0 115 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 A0A1B0GX12 115 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 CIB4A0PJX0 185 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 NDUFAB1O14561 156 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 NPIPB7O75200 414 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 LYZL6O75951 148 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 KRT33AO76009 404 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 VAMP5O95183 116 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 CNOT4O95628 575 aaKnown RBP12.59□□□□□ -0.39
VAMP4-203ENST00000474047 HRGP04196 525 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 CDH12P55289 794 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 EGR4Q05215 589 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 LIPEQ05469 1076 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 SLC17A1Q14916 467 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 SWT1Q5T5J6 900 aaKnown RBP12.59□□□□□ -0.39
VAMP4-203ENST00000474047 FAM69AQ5T7M9 428 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 ZNF613Q6PF04 617 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 AAED1Q7RTV5 226 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 OR9K2Q8NGE7 335 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 OR6T1Q8NGN1 323 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 TPD52L3Q96J77 140 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
VAMP4-203ENST00000474047 WFDC6Q9BQY6 131 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 MYLK2Q9H1R3 596 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 NGBQ9NPG2 151 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 ASB6Q9NWX5 421 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 RASD1Q9Y272 281 aa12.59□□□□□ -0.39
VAMP4-203ENST00000474047 FREM1Q5H8C1 2179 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 TPST2O60704 377 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 NQO1P15559 274 aaKnown RBP12.58□□□□□ -0.4
VAMP4-203ENST00000474047 CBLP22681 906 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 PRDX6P30041 224 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 SLC7A2P52569 658 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 FAPQ12884 760 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 C1DQ13901 141 aaKnown RBP12.58□□□□□ -0.4
VAMP4-203ENST00000474047 MFSD13AQ14CX5 517 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 STK11Q15831 433 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 SLC15A3Q8IY34 581 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 LZICQ8WZA0 190 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 HSD17B8Q92506 261 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 TAAR8Q969N4 342 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 MUCL1Q96DR8 90 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 CMTM6Q9NX76 183 aa12.58□□□□□ -0.4
VAMP4-203ENST00000474047 TRAPPC13A5PLN9 417 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 DCTN3O75935 186 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 PTNP21246 168 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 DNASE1P24855 282 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 DNAJA1P31689 397 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms