RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 KDM7AQ6ZMT4 941 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 DNM1P46Q6ZS02 220 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 GDPD3Q7L5L3 318 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 NRMQ8IXM6 262 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 MYOCDQ8IZQ8 938 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 OR4D9Q8NGE8 314 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 AGAP11Q8TF27 550 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 PSMG2Q969U7 264 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 C10orf35Q96D05 121 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 SEC22AQ96IW7 307 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 CCT8L2Q96SF2 557 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 SOSTQ9BQB4 213 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 RHOXF2Q9BQY4 288 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 DPH7Q9BTV6 452 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 CHRDL1Q9BU40 450 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 ROPN1BQ9BZX4 212 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 RHBGQ9H310 441 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 VCX3BQ9H321 246 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 CAB39LQ9H9S4 337 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 GNB4Q9HAV0 340 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 VCX3AQ9NNX9 186 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 RAB20Q9NX57 234 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 WARS2Q9UGM6 360 aaKnown RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 KLK13Q9UKR3 277 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 MEMO1Q9Y316 297 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 IFT52Q9Y366 437 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 TRAPPC8Q9Y2L5 1435 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 A2MP01023 1474 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF518AQ6AHZ1 1483 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 NRXN1Q9ULB1 1477 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 CROCC2H7BZ55 1655 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 TCF20Q9UGU0 1960 aaKnown RBP3.32□□□□□ -1.88
BRCA1-212ENST00000473961 PPIAL4EA0A075B759 164 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 CCT8L1PA6NM43 557 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF716A6NP11 495 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 RGS16O15492 202 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-212ENST00000473961 PRKAB2O43741 272 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 GNA14O95837 355 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 IGHG4P01861 327 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 UQCRFS1P1P0C7P4 283 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF735P0CB33 412 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 CCDC166P0CW27 439 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 PPIAL4FP0DN26 164 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 TNNI1P19237 187 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 ADORA2BP29275 332 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 NTSP30990 170 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 STARP49675 285 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 VEGFCP49767 419 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 SLC25A1P53007 311 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 ATP1B3P54709 279 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 BEX3Q00994 111 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 CKAP4Q07065 602 aaKnown RBP3.32□□□□□ -1.88
BRCA1-212ENST00000473961 KLRB1Q12918 225 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 IFT88Q13099 833 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 C1orf61Q13536 156 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 DPYSL3Q14195 570 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 TIGITQ495A1 244 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 FAM120AOSQ5T036 256 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 OR2A2Q6IF42 318 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF343Q6P1L6 599 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 IQCF2Q8IXL9 164 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 ARHGAP18Q8N392 663 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 ERMNQ8TAM6 284 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 DYDC1Q8WWB3 177 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 UBE2E3Q969T4 207 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 OPTNQ96CV9 577 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 SERAC1Q96JX3 654 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 SLC38A2Q96QD8 506 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 PANX2Q96RD6 677 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 IL4I1Q96RQ9 567 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 CYP2S1Q96SQ9 504 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 MCHR1Q99705 422 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 NAPGQ99747 312 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-212ENST00000473961 RIOK1Q9BRS2 568 aaKnown RBP3.32□□□□□ -1.88
BRCA1-212ENST00000473961 NUP58Q9BVL2 599 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 FAM192AQ9GZU8 254 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 VCXQ9H320 206 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 GLIPR2Q9H4G4 154 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 POPDC2Q9HBU9 364 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 TMEM165Q9HC07 324 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 DMAP1Q9NPF5 467 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-212ENST00000473961 SIGLEC8Q9NYZ4 499 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 SPRR3Q9UBC9 169 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 PAIP2BQ9ULR5 123 aaKnown RBP3.32□□□□□ -1.88
BRCA1-212ENST00000473961 CAB39Q9Y376 341 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-212ENST00000473961 FLVCR1Q9Y5Y0 555 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 UBN2Q6ZU65 1347 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 NSD2O96028 1365 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 IQGAP2Q13576 1575 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 HECW2Q9P2P5 1572 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 ADCY10Q96PN6 1610 aa3.32□□□□□ -1.88
BRCA1-212ENST00000473961 CEP152O94986 1710 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 USP32Q8NFA0 1604 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 CDK13Q14004 1512 aaKnown RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 KDM6AO15550 1401 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 LOC100131303A0A0U1RQF7 123 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 IQANK1A0A1B0GTG1 560 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 A0A1W2PPR1 153 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 HEATR9A2RTY3 570 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms