RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CDH12P55289 794 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 SLC17A1Q14916 467 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 FAM91A1Q658Y4 838 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 ULK3Q6PHR2 472 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 RANBP3LQ86VV4 465 aaPredicted RBP16.77■□□□□ 0.28
PTCD3-210ENST00000473829 MICU2Q8IYU8 434 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 SLC26A7Q8TE54 656 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 DNAJA4Q8WW22 397 aaPredicted RBP16.77■□□□□ 0.28
PTCD3-210ENST00000473829 SLC38A4Q969I6 547 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 ZC3HAV1LQ96H79 300 aaKnown RBP16.77■□□□□ 0.28
PTCD3-210ENST00000473829 MCHR1Q99705 422 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 NAA11Q9BSU3 229 aaPredicted RBP16.77■□□□□ 0.28
PTCD3-210ENST00000473829 EVA1AQ9H8M9 152 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 EMC3Q9P0I2 261 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 SEC14L4Q9UDX3 406 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 NOSIPQ9Y314 301 aaKnown RBP16.77■□□□□ 0.28
PTCD3-210ENST00000473829 FLVCR1Q9Y5Y0 555 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 PRR14LQ5THK1 2151 aa16.77■□□□□ 0.27
PTCD3-210ENST00000473829 ABCA4P78363 2273 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 A0A1W2PPR1 153 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 CPSF4LA6NMK7 179 aaKnown RBP16.76■□□□□ 0.27
PTCD3-210ENST00000473829 FMO6PO60774 539 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 FZD7O75084 574 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 LYPD3O95274 346 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 ADAP00813 363 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 IGHV3-9P01782 118 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 HRGP04196 525 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 THY1P04216 161 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 PNMTP11086 282 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 PSMB1P20618 241 aaKnown RBP16.76■□□□□ 0.27
PTCD3-210ENST00000473829 HACD2Q6Y1H2 254 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 ARPINQ7Z6K5 226 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 CDC20BQ86Y33 519 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 SLC47A1Q96FL8 570 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 TAPBPLQ9BX59 468 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 ACTR6Q9GZN1 396 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 EFCAB1Q9HAE3 211 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 TMEM27Q9HBJ8 222 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 C6orf203Q9P0P8 240 aaPredicted RBP16.76■□□□□ 0.27
PTCD3-210ENST00000473829 OTOGQ6ZRI0 2925 aa16.76■□□□□ 0.27
PTCD3-210ENST00000473829 SPG11Q96JI7 2443 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 A0A087WUJ7 227 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 ELOVL7A1L3X0 281 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 DEFB108AA8MXU0 73 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 GPR171O14626 319 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 CRYGSP22914 178 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 PRDX6P30041 224 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 LIPEQ05469 1076 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 LRRC23Q53EV4 343 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-210ENST00000473829 ENTPD8Q5MY95 495 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 WDR88Q6ZMY6 472 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 Q6ZT83 130 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 CDH24Q86UP0 819 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 ZIC4Q8N9L1 334 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 OR9K2Q8NGE7 335 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 MFSD8Q8NHS3 518 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 RNF217Q8TC41 542 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 TAAR8Q969N4 342 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 SLC25A36Q96CQ1 311 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 CMTM5Q96DZ9 223 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 HOPXQ9BPY8 73 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-210ENST00000473829 LIME1Q9H400 295 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 FAM53CQ9NYF3 392 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 GPR52Q9Y2T5 361 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 ARL2BPQ9Y2Y0 163 aa16.75■□□□□ 0.27
PTCD3-210ENST00000473829 AKAP6Q13023 2319 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 KDELR2P33947 212 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 SFRP5Q5T4F7 317 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 ZNF613Q6PF04 617 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 CASP12Q6UXS9 341 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 CARM1Q86X55 608 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 ZNF100Q8IYN0 542 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 ADAMTS16Q8TE57 1224 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 RASSF5Q8WWW0 418 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 APH1AQ96BI3 265 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 S100PBPQ96BU1 408 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 ZNF385AQ96PM9 386 aaKnown RBP16.74■□□□□ 0.27
PTCD3-210ENST00000473829 PCDHAC1Q9H158 963 aa16.74■□□□□ 0.27
PTCD3-210ENST00000473829 TRAV36DV7A0A075B6V5 113 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 CASKO14936 926 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 SHOX2O60902 331 aaPredicted RBP16.73■□□□□ 0.27
PTCD3-210ENST00000473829 LYZL6O75951 148 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 COX5AP20674 150 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 IGHV1-2P23083 117 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 LOXP28300 417 aaPredicted RBP16.73■□□□□ 0.27
PTCD3-210ENST00000473829 GSK3BP49841 420 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 LTBQ06643 244 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 CYBRD1Q53TN4 286 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 SWT1Q5T5J6 900 aaKnown RBP16.73■□□□□ 0.27
PTCD3-210ENST00000473829 FAM69AQ5T7M9 428 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 FBXW10Q5XX13 1052 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 LINC00114Q6XXX2 140 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 GPAT4Q86UL3 456 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 KDM8Q8N371 416 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 PROX1Q92786 737 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 KISS1RQ969F8 398 aaPredicted RBP16.73■□□□□ 0.27
PTCD3-210ENST00000473829 SF3B5Q9BWJ5 86 aaKnown RBP16.73■□□□□ 0.27
PTCD3-210ENST00000473829 ALG2Q9H553 416 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 FANCFQ9NPI8 374 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 ZNF226Q9NYT6 803 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms