RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 C11orf88Q6PI97 169 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 UQCC3Q6UW78 93 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 OLIG3Q7RTU3 272 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 PAQR7Q86WK9 346 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 BEST4Q8NFU0 473 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 OR52E2Q8NGJ4 325 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 PFN4Q8NHR9 129 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 RPS4Y2Q8TD47 263 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 TNFAIP8L1Q8WVP5 186 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 RERGQ96A58 199 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 ORAI1Q96D31 301 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 RSPRY1Q96DX4 576 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 PHYHIPLQ96FC7 376 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 C10orf90Q96M02 699 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 GINS4Q9BRT9 223 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ARL6Q9H0F7 186 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 NOX4Q9NPH5 578 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 MEPEQ9NQ76 525 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 EVA1BQ9NVM1 165 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ZNF337Q9Y3M9 751 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 PRKAB1Q9Y478 270 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 MAP1BP46821 2468 aaKnown RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 IGKV1-8A0A0C4DH67 115 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 TTLL8A6PVC2 850 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 XRCC3O43542 346 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 CDC40O60508 579 aaKnown RBP eCLIP5.63□□□□□ -1.51
HERC4-209ENST00000473533 PMS2P2O95744 297 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 HPXP02790 462 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 FGF2P09038 288 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 GABRA1P14867 456 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 CSF2RAP15509 400 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 NAT1P18440 290 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 DPP4P27487 766 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 TLE2Q04725 743 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 CCINQ13939 588 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ZNF234Q14588 700 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 HLXQ14774 488 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 ALG10BQ5I7T1 473 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 EXOSC6Q5RKV6 272 aaKnown RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 TMEM81Q6P7N7 255 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 FAM199XQ6PEV8 388 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 FAM111BQ6SJ93 734 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 JAZF1Q86VZ6 243 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ETFBKMTQ8IXQ9 262 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ZNF433Q8N7K0 673 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 OR6M1Q8NGM8 313 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 OR6K3Q8NGY3 331 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 OR6N1Q8NGY5 312 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 OR51A7Q8NH64 312 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 LCN9Q8WX39 176 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 HSPA12BQ96MM6 686 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 OR14A2Q96R54 314 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 SLC25A21Q9BQT8 299 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 G6PC3Q9BUM1 346 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 RXFP3Q9NSD7 469 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 COMMD9Q9P000 198 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 PCDH10Q9P2E7 1040 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 CHRNA9Q9UGM1 479 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 APOBEC3BQ9UH17 382 aaKnown RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 MRPS23Q9Y3D9 190 aaKnown RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 ENTPD2Q9Y5L3 495 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 WDR87Q6ZQQ6 2873 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 PLXND1Q9Y4D7 1925 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 A0A0A6YYH2 397 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 CIB4A0PJX0 185 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 A6NJ64 397 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ACOD1A6NK06 481 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 H7C417 338 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 SUSD5O60279 629 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 CTNSO60931 367 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 SDC3O75056 442 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 MOSPD3O75425 235 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 PRKRAO75569 313 aaKnown RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 TOXO94900 526 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 LYPD3O95274 346 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 MGMTP16455 207 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 C5AR1P21730 350 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 HTR2AP28223 471 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 P2RX1P51575 399 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 FXYD6P3P58550 94 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 TAS2R20P59543 309 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 RPS21P63220 83 aaKnown RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 TSC22D1Q15714 1073 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 EMC4Q5J8M3 183 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 TFAP2EQ6VUC0 442 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 FCRLAQ7L513 359 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 SLC16A9Q7RTY1 509 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 BVESQ8NE79 360 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 OR5AK2Q8NH90 309 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 CD99L2Q8TCZ2 262 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 GPR148Q8TDV2 347 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ADAMTS18Q8TE60 1221 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ZG16BQ96DA0 208 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 DERL3Q96Q80 235 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 ZNF426Q9BUY5 554 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 AUNIPQ9H7T9 357 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 SCPEP1Q9HB40 452 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 MYOZ1Q9NP98 299 aaPredicted RBP5.63□□□□□ -1.51
HERC4-209ENST00000473533 ADAP2Q9NPF8 381 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 PCDHB16Q9NRJ7 776 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms