RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 C21orf59P57076 290 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 GAGE1Q13065 139 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 GAGE4Q13068 117 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TRIM16LQ309B1 348 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TMEM31Q5JXX7 168 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 FAM122CQ6P4D5 195 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 SH2D5Q6ZV89 423 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 FAM122BQ7Z309 247 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 ACOT4Q8N9L9 421 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PROKR2Q8NFJ6 384 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 OR9Q2Q8NGE9 314 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 RFESDQ8TAC1 157 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 LMO3Q8TAP4 145 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 NDNFQ8TB73 568 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 CAPSLQ8WWF8 208 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TFGQ92734 400 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 DCPSQ96C86 337 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 ALS2CR12Q96Q35 445 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 OR5B12Q96R08 314 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 CCDC28BQ9BUN5 200 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 COMMD4Q9H0A8 199 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 DNTTIP1Q9H147 329 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 SH2D2AQ9NP31 389 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 CLEC5AQ9NY25 188 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 MRPL39Q9NYK5 338 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 C19orf25Q9UFG5 118 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 RPH3ALQ9UNE2 315 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 SCML2Q9UQR0 700 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 MROH7-TTC4A0A0A0MT08 1334 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 MROH7Q68CQ1 1323 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 NOTCH4Q99466 2003 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TRAV6A0A075B6T7 132 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 PPIAL4EA0A075B759 164 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 IGHV4OR15-8A0A075B7B6 117 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 SAA2-SAA4A0A096LPE2 208 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 IGHV3-20A0A0C4DH32 117 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 GOLGA8QA0A0J9YX86 632 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 A0A1B0GUH1 482 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 A0A1B0GW15 77 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 ARPC1BO15143 372 aaKnown RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 PDE5AO76074 875 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 OXSR1O95747 527 aaPredicted RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 TMEM50AO95807 157 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 IGFBP1P08833 259 aaPredicted RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 PPIAL4FP0DN26 164 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TROVE2P10155 538 aaKnown RBP eCLIP2.21□□□□□ -2.06
XRN1-210ENST00000472697 DBTP11182 482 aaKnown RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 CCNB1P14635 433 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 GABRG2P18507 467 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 AOC1P19801 751 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 NPR2P20594 1047 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 LINC00205P59089 165 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 NTHL1P78549 312 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 SRSF9Q13242 221 aaKnown RBP eCLIP2.21□□□□□ -2.06
XRN1-210ENST00000472697 KRTAP15-1Q3LI76 137 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 NKAIN1Q4KMZ8 207 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 LEG1Q6P5S2 330 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 CMTM8Q8IZV2 173 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 CYB561A3Q8NBI2 242 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 AQP11Q8NBQ7 271 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 OR4Q3Q8NH05 313 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 C16orf52Q8NHV5 167 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 NDRG1Q92597 394 aaKnown RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 MYDGFQ969H8 173 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 MS4A4EQ96PG1 132 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 NKX3-1Q99801 234 aaPredicted RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 CLEC7AQ9BXN2 247 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 OPN3Q9H1Y3 402 aaPredicted RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 ACP6Q9NPH0 428 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TEX10Q9NXF1 929 aaPredicted RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 TUBGCP4Q9UGJ1 667 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 ZNHIT2Q9UHR6 403 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 PPIAL4AQ9Y536 164 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 MAD1L1Q9Y6D9 718 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 SH3TC1Q8TE82 1336 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 LRRC37A2A6NM11 1700 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 DDX60LQ5H9U9 1706 aaKnown RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 ARAP2Q8WZ64 1704 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TEX48A0A1B0GUV7 120 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TCRBV9S1A1TA0A576 114 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 ARHGEF33A8MVX0 844 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TMCO5BA8MYB1 307 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 HSBP1L1C9JCN9 74 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 SLC9A3R1O14745 358 aaPredicted RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 TM9SF1O15321 606 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TAPBPO15533 448 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 PRKYO43930 277 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 PCDH7O60245 1069 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 PSIP1O75475 530 aaKnown RBP2.21□□□□□ -2.06
XRN1-210ENST00000472697 CD160O95971 181 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 NUDT3O95989 172 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 IGHV3-9P01782 118 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 HPGDP15428 266 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 CERS1P27544 350 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 LEPP41159 167 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 PRKXP51817 358 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 LCN2P80188 198 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 REG3AQ06141 175 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TAF13Q15543 124 aa2.21□□□□□ -2.06
XRN1-210ENST00000472697 TATDN3Q17R31 274 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms