RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 IGKV3-11P04433 115 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 UBL4AP11441 157 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 NUDT1P36639 197 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 ELOA3BQ3SY89 546 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 MARCH3Q86UD3 253 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 GDPD1Q8N9F7 314 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 ELOA3Q8NG57 546 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 SETD6Q8TBK2 473 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 HSD17B8Q92506 261 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 ZDHHC12Q96GR4 267 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 MSANTD3Q96H12 275 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 HOXD1Q9GZZ0 328 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.21
UBXN11-213ENST00000472155 CTSFQ9UBX1 484 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 GNG8Q9UK08 70 aa13.71□□□□□ -0.21
UBXN11-213ENST00000472155 IGKV3D-11A0A0A0MRZ8 115 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 TMEM221A6NGB7 291 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 SC5DO75845 299 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 NR0B1P51843 470 aaKnown RBP13.71□□□□□ -0.22
UBXN11-213ENST00000472155 SMAD2Q15796 467 aaKnown RBP13.71□□□□□ -0.22
UBXN11-213ENST00000472155 LEG1Q6P5S2 330 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 TSSK4Q6SA08 328 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 ESPNLQ6ZVH7 1005 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 SLC35F2Q8IXU6 374 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 OR4M1Q8NGD0 313 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 OR5H6Q8NGV6 325 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 OR6F1Q8NGZ6 308 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 UBQLN4Q9NRR5 601 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 HAO2Q9NYQ3 351 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 EXTL2Q9UBQ6 330 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 KLHDC2Q9Y2U9 406 aa13.71□□□□□ -0.22
UBXN11-213ENST00000472155 H3BSH0 61 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 IFNGP01579 166 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 MTNR1BP49286 362 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 RPS11P62280 158 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 RPS4XP62701 263 aaKnown RBP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 ZNF117Q03924 483 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 NSDHLQ15738 373 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 RSBN1Q5VWQ0 802 aaPredicted RBP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 SAMD12Q8N8I0 201 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 CHAC2Q8WUX2 184 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 FOXN4Q96NZ1 517 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 COQ7Q99807 217 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 ENAMQ9NRM1 1142 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 PRODH2Q9UF12 536 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 ATXN7L1Q9ULK2 861 aaPredicted RBP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 IL33O95760 270 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 TACR3P29371 465 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 PPICP45877 212 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 RPS5P46782 204 aaKnown RBP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 ARL4DP49703 201 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 HSD11B2P80365 405 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 KRR1Q13601 381 aaKnown RBP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 SERTAD2Q14140 314 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 ZNF74Q16587 644 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 RNASE12Q5GAN4 147 aaKnown RBP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 ATAD3CQ5T2N8 411 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 SFXN4Q6P4A7 337 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 RAB43Q86YS6 212 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 CADM4Q8NFZ8 388 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 OR14A2Q96R54 314 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 CNN2Q99439 309 aaKnown RBP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 PAIP2BQ9ULR5 123 aaKnown RBP13.7□□□□□ -0.22
UBXN11-213ENST00000472155 ZNF337Q9Y3M9 751 aa13.7□□□□□ -0.22
UBXN11-213ENST00000472155 A0A1B0GTH9 108 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 SCDO00767 359 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 ZNF264O43296 627 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 SEC14L5O43304 696 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 GUSBP08236 651 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 POU3F3P20264 500 aaPredicted RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 NANOS3P60323 173 aaKnown RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 LINC01590Q5TEZ4 76 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 PAMR1Q6UXH9 720 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 DPY19L2P2Q6ZN68 376 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 PXKQ7Z7A4 578 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 CMIPQ8IY22 773 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 TAAR8Q969N4 342 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 RNF166Q96A37 237 aaPredicted RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 LPAR4Q99677 370 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 NPAS1Q99742 590 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 WACQ9BTA9 647 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 SRA1Q9HD15 236 aaKnown RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 NCDNQ9UBB6 729 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 NLKQ9UBE8 527 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 EPHA6Q9UF33 1036 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 NUFIP1Q9UHK0 495 aaKnown RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 ING1Q9UK53 422 aaPredicted RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 MKL2Q9ULH7 1088 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 BAIAP2Q9UQB8 552 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 C2orf72A6NCS6 295 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 ANKRD61A6NGH8 418 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 TVP23AA6NH52 213 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 DIO1P49895 249 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 GDI2P50395 445 aaKnown RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 PSMD4P55036 377 aaKnown RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 EBPQ15125 230 aaKnown RBP13.69□□□□□ -0.22
UBXN11-213ENST00000472155 HBMQ6B0K9 141 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 OR5M10Q6IEU7 315 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 MTFR2Q6P444 385 aa13.69□□□□□ -0.22
UBXN11-213ENST00000472155 THAP4Q8WY91 577 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms