RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 HSD17B8Q92506 261 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 POP5Q969H6 163 aaKnown RBP11.99□□□□□ -0.49
HMGN1-211ENST00000471260 EME1Q96AY2 570 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 ZG16BQ96DA0 208 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 HS3ST6Q96QI5 342 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 CCL19Q99731 98 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 PKP2Q99959 881 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 TMEM204Q9BSN7 226 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 QRSL1Q9H0R6 528 aaKnown RBP11.99□□□□□ -0.49
HMGN1-211ENST00000471260 SLC38A1Q9H2H9 487 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 UBTD1Q9HAC8 227 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 THUMPD1Q9NXG2 353 aaKnown RBP11.99□□□□□ -0.49
HMGN1-211ENST00000471260 CCDC167Q9P0B6 97 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 CHRNA9Q9UGM1 479 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 ING1Q9UK53 422 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-211ENST00000471260 PRAMEF27A3QJZ7 478 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 FAAHO00519 579 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 RFXANKO14593 260 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 SMAD9O15198 467 aaKnown RBP11.98□□□□□ -0.49
HMGN1-211ENST00000471260 PMS2P2O95744 297 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 CLPTM1O96005 669 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 HOXB6P17509 224 aaKnown RBP11.98□□□□□ -0.49
HMGN1-211ENST00000471260 IL32P24001 234 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 GSTT1P30711 240 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 OR3A2P47893 321 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 TUBA4AP68366 448 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 C11orf91Q3C1V1 193 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 Q6ZT83 130 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 FKBP9P1Q75LS8 142 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 OLIG3Q7RTU3 272 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 DHFR2Q86XF0 187 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 WFDC11Q8NEX6 87 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 KISS1RQ969F8 398 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-211ENST00000471260 S100PBPQ96BU1 408 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 ZHX1-C8orf76Q96EF9 292 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 INPP5KQ9BT40 448 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 RMND5AQ9H871 391 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 CTPS2Q9NRF8 586 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 CALML5Q9NZT1 146 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 ACTR3BQ9P1U1 418 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 TRAPPC4Q9Y296 219 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 ARID1AO14497 2285 aa11.98□□□□□ -0.49
HMGN1-211ENST00000471260 FREM1Q5H8C1 2179 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 IGKV3D-15A0A087WSY6 115 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 IGHV3-15A0A0B4J1V0 119 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 PRORSD1PA6NEY8 169 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF814B7Z6K7 855 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 PDLIM1O00151 329 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ADAP00813 363 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 DBIP07108 87 aaKnown RBP11.97□□□□□ -0.49
HMGN1-211ENST00000471260 CHRM4P08173 479 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 NR2F1P10589 423 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 UMPSP11172 480 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 IL7RP16871 459 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF26P17031 533 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-211ENST00000471260 RPS4Y1P22090 263 aaKnown RBP11.97□□□□□ -0.49
HMGN1-211ENST00000471260 CDKN2CP42773 168 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 IDH2P48735 452 aaKnown RBP11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ERFP50548 548 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 SLC7A2P52569 658 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 SYPL1Q16563 259 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ZSWIM7Q19AV6 140 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ABLIM2Q6H8Q1 611 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF704Q6ZNC4 412 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-211ENST00000471260 GALNT5Q7Z7M9 940 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 BIVMQ86UB2 503 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 CARM1Q86X55 608 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ADGRG3Q86Y34 549 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 WFDC8Q8IUA0 241 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 KRTAP1-3Q8IUG1 177 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 PEX5LQ8IYB4 626 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF440Q8IYI8 595 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 DGCR14Q96DF8 476 aaKnown RBP11.97□□□□□ -0.49
HMGN1-211ENST00000471260 PLPPR2Q96GM1 343 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ITCHQ96J02 903 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 C18orf12Q96KH6 178 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 ANKRD60Q9BZ19 345 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 GSX2Q9BZM3 304 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 EMC3Q9P0I2 261 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 P2RX2Q9UBL9 471 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 LEF1Q9UJU2 399 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-211ENST00000471260 DSCAMO60469 2012 aa11.97□□□□□ -0.49
HMGN1-211ENST00000471260 RAI1Q7Z5J4 1906 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-211ENST00000471260 ACANP16112 2415 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 A0A1W2PP18 115 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 FAM171A2A8MVW0 826 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 C9JVG2 144 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 GPR171O14626 319 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF208O43345 1280 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 EIF1BO60739 113 aaKnown RBP11.96□□□□□ -0.49
HMGN1-211ENST00000471260 BCAS1O75363 584 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-211ENST00000471260 GSNP06396 782 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 TFPIP10646 304 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 PAX1P15863 534 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 RYKP34925 604 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 POLR2HP52434 150 aaKnown RBP11.96□□□□□ -0.49
HMGN1-211ENST00000471260 PLAURQ03405 335 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 LSAMPQ13449 338 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 FXNQ16595 210 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 KRTAP21-3Q3LHN1 58 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 566.7 ms