RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 TMEM163Q8TC26 289 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ZBTB8AQ96BR9 441 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 SNRNP40Q96DI7 357 aaKnown RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 TMEM41AQ96HV5 264 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 FAM46AQ96IP4 442 aaKnown RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 SNX18Q96RF0 628 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 GPA33Q99795 319 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ANGPTL4Q9BY76 406 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 POTEKPQ9BYX7 375 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 UBQLN3Q9H347 655 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 METTL7AQ9H8H3 244 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ZBTB20Q9HC78 741 aaPredicted RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF160Q9HCG1 818 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ATP13A2Q9NQ11 1180 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 CTPS2Q9NRF8 586 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 CMC2Q9NRP2 79 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 SACM1LQ9NTJ5 587 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 TBC1D23Q9NUY8 699 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 PPP4R1LQ9P1A2 415 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 PSORS1C1Q9UIG5 152 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 HIF3AQ9Y2N7 669 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 MRPS18CQ9Y3D5 142 aaKnown RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 PCDHGB5Q9Y5G0 923 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 CORINQ9Y5Q5 1042 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 CHCHD2Q9Y6H1 151 aaPredicted RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 SHANK1Q9Y566 2161 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 IGKV1D-42A0A075B6H8 117 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 A0A1B0GUH1 482 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 A6NL46 340 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 CDC42EP2O14613 210 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 PRODHO43272 600 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 RGS10O43665 173 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 NPIPB7O75200 414 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 SLC25A12O75746 678 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 NDUFB2O95178 105 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF17P17021 662 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 FUT4P22083 530 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 EEF1B2P24534 225 aaKnown RBP8.29□□□□□ -1.08
PTPRE-207ENST00000471218 MST1P26927 711 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 POU1F1P28069 291 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 OTX2P32243 289 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 CASP3P42574 277 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 GPR4P46093 362 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 CCR4P51679 360 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF41P51814 821 aaPredicted RBP8.29□□□□□ -1.08
PTPRE-207ENST00000471218 RIPPLY3P57055 190 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 FBXW4P57775 412 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 CRYZQ08257 329 aaKnown RBP8.29□□□□□ -1.08
PTPRE-207ENST00000471218 RAB40BQ12829 278 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 MRPL49Q13405 166 aaKnown RBP8.29□□□□□ -1.08
PTPRE-207ENST00000471218 QPRTQ15274 297 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF74Q16587 644 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 PLEKHN1Q494U1 663 aaPredicted RBP8.29□□□□□ -1.08
PTPRE-207ENST00000471218 DCAF10Q5QP82 559 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 FAM69AQ5T7M9 428 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 GPR139Q6DWJ6 353 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 CBLN3Q6UW01 205 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 MARCH3Q86UD3 253 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 KIF18BQ86Y91 864 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 PRR22Q8IZ63 422 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 GALNT16Q8N428 558 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 SCAIQ8N9R8 606 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 Q8NA96 180 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 ADPRHL1Q8NDY3 354 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF420Q8TAQ5 688 aaPredicted RBP8.29□□□□□ -1.08
PTPRE-207ENST00000471218 APH1BQ8WW43 257 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 PLEKHA8Q96JA3 519 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 MYCBPQ99417 103 aaPredicted RBP8.29□□□□□ -1.08
PTPRE-207ENST00000471218 PRR14Q9BWN1 585 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 JAM3Q9BX67 310 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 TSSK6Q9BXA6 273 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 CDCA4Q9BXL8 241 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 MFRPQ9BY79 579 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 RNF32Q9H0A6 362 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 OR52D1Q9H346 318 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 SERINC1Q9NRX5 453 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 HPF1Q9NWY4 346 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF226Q9NYT6 803 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 KLRF1Q9NZS2 232 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 ERRFI1Q9UJM3 462 aaPredicted RBP8.29□□□□□ -1.08
PTPRE-207ENST00000471218 KLHL21Q9UJP4 597 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 OSGIN1Q9UJX0 560 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 NTNG1Q9Y2I2 539 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 ABCA12Q86UK0 2595 aa8.29□□□□□ -1.08
PTPRE-207ENST00000471218 DPPA5A6NC42 116 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 KDM4EB2RXH2 506 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-207ENST00000471218 LINC01387J3KSC0 135 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 BHLHE40O14503 412 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 SNPHO15079 494 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 SURF4O15260 269 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 OIP5O43482 229 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 DNPH1O43598 174 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 SCO2O43819 266 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 FAM20BO75063 409 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 SOX14O95416 240 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 TXNDC12O95881 172 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 ASAH2BP0C7U1 165 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms