RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TAPBPLQ9BX59 468 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ACTR6Q9GZN1 396 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 PIF1Q9H611 641 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 C6orf203Q9P0P8 240 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ST6GALNAC2Q9UJ37 374 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 SLC13A4Q9UKG4 626 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 FLVCR1Q9Y5Y0 555 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 MAP1AP78559 2803 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-215ENST00000470338 RAI1Q7Z5J4 1906 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-215ENST00000470338 A0A0B4J2E0 115 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 A0A1B0GX12 115 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 KLF4O43474 513 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 FMO6PO60774 539 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 MRPL33O75394 65 aaKnown RBP12.51□□□□□ -0.41
TOP3B-215ENST00000470338 COX4I1P13073 169 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 CD247P20963 164 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 DRD4P21917 467 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 LOXP28300 417 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-215ENST00000470338 LSP1P33241 339 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 POU4F3Q15319 338 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 TESK1Q15569 626 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 ALG10BQ5I7T1 473 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 FBXW9Q5XUX1 488 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 ERICH5Q6P6B1 374 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 C5orf46Q6UWT4 87 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.51□□□□□ -0.41
TOP3B-215ENST00000470338 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-215ENST00000470338 LURAP1LQ8IV03 231 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 RASSF5Q8WWW0 418 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 S100PBPQ96BU1 408 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 KTI12Q96EK9 354 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-215ENST00000470338 SLC47A1Q96FL8 570 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 USB1Q9BQ65 265 aaKnown RBP12.51□□□□□ -0.41
TOP3B-215ENST00000470338 MYLK2Q9H1R3 596 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 TMEM27Q9HBJ8 222 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 PARPBPQ9NWS1 579 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 EDARQ9UNE0 448 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 SLC9A8Q9Y2E8 581 aa12.51□□□□□ -0.41
TOP3B-215ENST00000470338 ROS1P08922 2347 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 IGKV1D-42A0A075B6H8 117 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 A0A087WUJ7 227 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 GMNCA6NCL1 334 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 OR2T1O43869 369 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 SNX3O60493 162 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 VAMP5O95183 116 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 AHSA1O95433 338 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 COX5AP20674 150 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 RPS5P46782 204 aaKnown RBP12.5□□□□□ -0.41
TOP3B-215ENST00000470338 IST1P53990 364 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 NCALDP61601 193 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 TSC22D1Q15714 1073 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 NPTX1Q15818 432 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
TOP3B-215ENST00000470338 BHLHA15Q7RTS1 189 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-215ENST00000470338 TREML1Q86YW5 311 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 OR9K2Q8NGE7 335 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 OR6T1Q8NGN1 323 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 SLC26A7Q8TE54 656 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-215ENST00000470338 TAAR8Q969N4 342 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 TMEM45BQ96B21 275 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 APH1AQ96BI3 265 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 PIK3IP1Q96FE7 263 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 MCHR1Q99705 422 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 ADPRHL2Q9NX46 363 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 ITGB1BP2Q9UKP3 347 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 USP22Q9UPT9 525 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 DSCAMO60469 2012 aa12.5□□□□□ -0.41
TOP3B-215ENST00000470338 FAM220BPB1ANY3 271 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 M0R3H8 397 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 IGHV1-2P23083 117 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 IL32P24001 234 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 GYS2P54840 703 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 CDH12P55289 794 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 BEX5Q5H9J7 111 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 FAM69AQ5T7M9 428 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 TMEM225Q6GV28 225 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 C8orf82Q6P1X6 216 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-215ENST00000470338 ZNF613Q6PF04 617 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 PAMR1Q6UXH9 720 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 LINC00114Q6XXX2 140 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 CPLX4Q7Z7G2 160 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 RBM45Q8IUH3 476 aaKnown RBP12.49□□□□□ -0.41
TOP3B-215ENST00000470338 ZNF433Q8N7K0 673 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-215ENST00000470338 OR4D11Q8NGI4 311 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 OR6S1Q8NH40 331 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 HSD17B8Q92506 261 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 SLC25A36Q96CQ1 311 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 NSRP1Q9H0G5 558 aaKnown RBP12.49□□□□□ -0.41
TOP3B-215ENST00000470338 PCDHAC1Q9H158 963 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 EFCAB1Q9HAE3 211 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 CMTM6Q9NX76 183 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 SELENONQ9NZV5 590 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 MALT1Q9UDY8 824 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 RASD1Q9Y272 281 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 AP3M1Q9Y2T2 418 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 CADP27708 2225 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 ALPK2Q86TB3 2170 aa12.49□□□□□ -0.41
TOP3B-215ENST00000470338 PRRC2AP48634 2157 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms