RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PGBD2Q6P3X8 592 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 WDR53Q7Z5U6 358 aaPredicted RBP15.93■□□□□ 0.14
MRPL28-208ENST00000469744 RBM45Q8IUH3 476 aaKnown RBP15.93■□□□□ 0.14
MRPL28-208ENST00000469744 TOR1AIP2Q8NFQ8 470 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 OR4N2Q8NGD1 307 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 OR1J4Q8NGS1 313 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 TRUB1Q8WWH5 349 aaKnown RBP15.93■□□□□ 0.14
MRPL28-208ENST00000469744 ASB5Q8WWX0 329 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 GTPBP3Q969Y2 492 aaKnown RBP15.93■□□□□ 0.14
MRPL28-208ENST00000469744 NTNG2Q96CW9 530 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 ADOQ96SZ5 270 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 STACQ99469 402 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 PIGUQ9H490 435 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 EVA1AQ9H8M9 152 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 CACYBPQ9HB71 228 aaKnown RBP15.93■□□□□ 0.14
MRPL28-208ENST00000469744 RASSF1Q9NS23 344 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 KLHL28Q9NXS3 571 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 ENPP5Q9UJA9 477 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 PDZD2O15018 2839 aa15.93■□□□□ 0.14
MRPL28-208ENST00000469744 CLCA1A8K7I4 914 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 M0R3H8 397 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 HPNP05981 417 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 THBS1P07996 1170 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 GUSBP08236 651 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 IFNA8P32881 189 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 PTGER4P35408 488 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 SNRPGP62308 76 aaKnown RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 CRYZQ08257 329 aaKnown RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 SEC23BQ15437 767 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 SMN1Q16637 294 aaKnown RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 WIPI1Q5MNZ9 446 aaPredicted RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 UBE2UQ5VVX9 321 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 MEX3BQ6ZN04 569 aaKnown RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 GDF7Q7Z4P5 450 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 YRDCQ86U90 279 aaKnown RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 OR6T1Q8NGN1 323 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 LILRB4Q8NHJ6 448 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 UBE2FQ969M7 185 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 EFHD2Q96C19 240 aaPredicted RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 POLR2J2Q9GZM3 115 aaKnown RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 POLR2J3Q9H1A7 115 aaKnown RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 ACOT13Q9NPJ3 140 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 NPDC1Q9NQX5 325 aaPredicted RBP15.92■□□□□ 0.14
MRPL28-208ENST00000469744 DUSP22Q9NRW4 184 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 ZNF232Q9UNY5 417 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 CSMD2Q7Z408 3487 aa15.92■□□□□ 0.14
MRPL28-208ENST00000469744 A0A0G2JNJ9 132 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 OR6C70A6NIJ9 312 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 C17orf51A8MQB3 221 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 SNPHO15079 494 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 OR10H3O60404 316 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 INMTO95050 263 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 GSTM3P21266 225 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 IL12BP29460 328 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 IFNGR2P38484 337 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 C12orf73Q69YU5 71 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 SLC30A6Q6NXT4 461 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 C1orf94Q6P1W5 598 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 PODNL1Q6PEZ8 512 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 COMTD1Q86VU5 262 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 ZNF295-AS1Q8N0V1 137 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 CDRT4Q8N9R6 151 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 FAM83FQ8NEG4 500 aaPredicted RBP15.91■□□□□ 0.14
MRPL28-208ENST00000469744 SLC7A13Q8TCU3 470 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 HOXB13Q92826 284 aaPredicted RBP15.91■□□□□ 0.14
MRPL28-208ENST00000469744 TIMP4Q99727 224 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 COPS4Q9BT78 406 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 FUNDC2Q9BWH2 189 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 SAP130Q9H0E3 1048 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 EQTNQ9NQ60 294 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 POLE3Q9NRF9 147 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 CNOT2Q9NZN8 540 aaKnown RBP15.91■□□□□ 0.14
MRPL28-208ENST00000469744 Q9UFV3 132 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 OR10H1Q9Y4A9 318 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 TSPAN2O60636 221 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 TOXO94900 526 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 CDK1P06493 297 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 ALOX5P09917 674 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 ACP2P11117 423 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 FUT4P22083 530 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 MAP3K8P41279 467 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 IDH2P48735 452 aaKnown RBP15.91■□□□□ 0.14
MRPL28-208ENST00000469744 PSG6Q00889 435 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 TFF3Q07654 80 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 PIN1Q13526 163 aaPredicted RBP15.91■□□□□ 0.14
MRPL28-208ENST00000469744 TRAM2Q15035 370 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 TBCEQ15813 527 aaPredicted RBP15.91■□□□□ 0.14
MRPL28-208ENST00000469744 TMEM201Q5SNT2 666 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 TMEM81Q6P7N7 255 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 FRRS1Q6ZNA5 592 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 LURAP1LQ8IV03 231 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 LIX1LQ8IVB5 337 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 WDSUB1Q8N9V3 476 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 SLC16A11Q8NCK7 471 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 OR52P1PQ8NH57 321 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 GGHQ92820 318 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 YIPF6Q96EC8 236 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 OTUB1Q96FW1 271 aaPredicted RBP15.91■□□□□ 0.14
MRPL28-208ENST00000469744 Q96MT0 163 aa15.91■□□□□ 0.14
MRPL28-208ENST00000469744 WFDC6Q9BQY6 131 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms