RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SMIM19Q96E16 107 aa13.42□□□□□ -0.26
CBWD3-205ENST00000469687 DNAJA3Q96EY1 480 aa13.42□□□□□ -0.26
CBWD3-205ENST00000469687 TSSK2Q96PF2 358 aa13.42□□□□□ -0.26
CBWD3-205ENST00000469687 SNX18Q96RF0 628 aa13.42□□□□□ -0.26
CBWD3-205ENST00000469687 GFM1Q96RP9 751 aaKnown RBP13.42□□□□□ -0.26
CBWD3-205ENST00000469687 THAP7Q9BT49 309 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-205ENST00000469687 PAQR5Q9NXK6 330 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-205ENST00000469687 KLHL21Q9UJP4 597 aa13.42□□□□□ -0.26
CBWD3-205ENST00000469687 ZNF337Q9Y3M9 751 aa13.42□□□□□ -0.26
CBWD3-205ENST00000469687 FER1L5A0AVI2 2057 aa13.42□□□□□ -0.26
CBWD3-205ENST00000469687 CACNA1CQ13936 2221 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 A0A1B0GVT2 93 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 EEF1E1O43324 174 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 SNRPBP14678 240 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 RAB3BP20337 219 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 NPR2P20594 1047 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 MAGEB1P43366 347 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 SRP9P49458 86 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 EFNA3P52797 238 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 PSMD4P55036 377 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 HSD17B7P56937 341 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 RPS4XP62701 263 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 GPR176Q14439 515 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 PON3Q15166 354 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 RNASE12Q5GAN4 147 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 FNDC7Q5VTL7 733 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 ESPNLQ6ZVH7 1005 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 TPRA1Q86W33 373 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 PRR22Q8IZ63 422 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 C7orf57Q8NEG2 295 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 SNX33Q8WV41 574 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 TSLPQ969D9 159 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 KCTD12Q96CX2 325 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 Q96M85 177 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 HSPA12BQ96MM6 686 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 RTN4RQ9BZR6 473 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 NXF5Q9H1B4 397 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 LANCL2Q9NS86 450 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 GMEB2Q9UKD1 530 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 TEX13CA0A0J9YWL9 993 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 A0A1W2PR77 199 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 RGS13O14921 159 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 FZD7O75084 574 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 SDHBP21912 280 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 CD38P28907 300 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 RBMS1P29558 406 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 TALDO1P37837 337 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 CDKN2AP42771 156 aaKnown RBP13.41□□□□□ -0.26
CBWD3-205ENST00000469687 PITPNBP48739 271 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 DIO1P49895 249 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 SIRPAP78324 504 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 CDONQ4KMG0 1287 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 CEP78Q5JTW2 689 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 SLC43A2Q8N370 569 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 MS4A15Q8N5U1 240 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 POMGNT2Q8NAT1 580 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 FAM71CQ8NEG0 241 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 OR14A16Q8NHC5 309 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 OR8D2Q9GZM6 311 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 NCDNQ9UBB6 729 aa13.41□□□□□ -0.26
CBWD3-205ENST00000469687 TRBV2A0A0J9YWF9 115 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 ELOA3DA6NLF2 546 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-205ENST00000469687 GLULP15104 373 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 EDNRAP25101 427 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 HLA-DMAP28067 261 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 SLC37A1P57057 533 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 EGR4Q05215 589 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 ELOA3BQ3SY89 546 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 Q5BKY6 102 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 COL13A1Q5TAT6 717 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-205ENST00000469687 LEG1Q6P5S2 330 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 TTLL10Q6ZVT0 673 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 ATG4DQ86TL0 474 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-205ENST00000469687 GKN2Q86XP6 184 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 ZNF511Q8NB15 262 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 ELOA3Q8NG57 546 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 ADAMTS18Q8TE60 1221 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 RFT1Q96AA3 541 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 MARVELD1Q9BSK0 173 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 NMNAT2Q9BZQ4 307 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 NRSN2Q9GZP1 204 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 LMAN1LQ9HAT1 526 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 PDE7BQ9NP56 450 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 RPRD1BQ9NQG5 326 aaKnown RBP13.4□□□□□ -0.26
CBWD3-205ENST00000469687 DHCR7Q9UBM7 475 aaKnown RBP13.4□□□□□ -0.26
CBWD3-205ENST00000469687 ITGB1BP2Q9UKP3 347 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 CA14Q9ULX7 337 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 AK6Q9Y3D8 172 aaKnown RBP13.4□□□□□ -0.26
CBWD3-205ENST00000469687 CFAP54Q96N23 3096 aa13.4□□□□□ -0.26
CBWD3-205ENST00000469687 CEP192Q8TEP8 1941 aa13.4□□□□□ -0.27
CBWD3-205ENST00000469687 BLACEA4D250 179 aa13.39□□□□□ -0.27
CBWD3-205ENST00000469687 CDC14CA4D256 554 aa13.39□□□□□ -0.27
CBWD3-205ENST00000469687 LILRA5A6NI73 299 aa13.39□□□□□ -0.27
CBWD3-205ENST00000469687 PPM1BO75688 479 aa13.39□□□□□ -0.27
CBWD3-205ENST00000469687 BTCP35070 178 aa13.39□□□□□ -0.27
CBWD3-205ENST00000469687 GBX2P52951 348 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-205ENST00000469687 ACTA2P62736 377 aa13.39□□□□□ -0.27
CBWD3-205ENST00000469687 ACTG2P63267 376 aa13.39□□□□□ -0.27
CBWD3-205ENST00000469687 LTBQ06643 244 aa13.39□□□□□ -0.27
CBWD3-205ENST00000469687 SKP2Q13309 424 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms