RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 CCNA2P20248 432 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 DDCP20711 480 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 ELK4P28324 431 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 TIA1P31483 386 aaKnown RBP eCLIP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 SPRP35270 261 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 EIF1P41567 113 aaKnown RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 ALDH3B1P43353 468 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 PSMD4P55036 377 aaKnown RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 PRPS1P60891 318 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 PSPHP78330 225 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 ZP4Q12836 540 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 SELENBP1Q13228 472 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 PDCD1Q15116 288 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 ZNHIT3Q15649 155 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 TBRG1Q3YBR2 411 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 GGTA1PQ4G0N0 100 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 KLHL26Q53HC5 615 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 SLC25A53Q5H9E4 307 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 KLF17Q5JT82 389 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 GRTP1Q5TC63 336 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 ASPHD2Q6ICH7 369 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 OR7E24Q6IFN5 339 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 CDC73Q6P1J9 531 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 CASP12Q6UXS9 341 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 BPIFB2Q8N4F0 458 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 DTX3Q8N9I9 347 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 HIPK4Q8NE63 616 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 OR51F2Q8NH61 342 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 CEP70Q8NHQ1 597 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 ZNF483Q8TF39 744 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 GRK7Q8WTQ7 553 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 PYROXD1Q8WU10 500 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 MZB1Q8WU39 189 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 CKAP2Q8WWK9 683 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 CDS1Q92903 461 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 PBKQ96KB5 322 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 ZNF385AQ96PM9 386 aaKnown RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 DIRC2Q96SL1 478 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 OSBPL9Q96SU4 736 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 THUMPD3Q9BV44 507 aaKnown RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 MRPL37Q9BZE1 423 aaKnown RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 SLITRK2Q9H156 845 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 MS4A5Q9H3V2 200 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 BRF2Q9HAW0 419 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 UBQLN4Q9NRR5 601 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 GIMAP4Q9NUV9 329 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 NSMCE4AQ9NXX6 385 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 MRTO4Q9UKD2 239 aaKnown RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 FZR1Q9UM11 496 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 AMDHD2Q9Y303 409 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 POLR3HQ9Y535 204 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-209ENST00000469511 TIMM22Q9Y584 194 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 FLVCR1Q9Y5Y0 555 aa4.51□□□□□ -1.69
PTPN4-209ENST00000469511 LOC100653049A0A140TA62 436 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 MDFIC2A0A1B0GVS7 189 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 OR6C65A6NJZ3 312 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 GJE1A6NN92 205 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 SYCE1LA8MT33 242 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 NPIPB9F8W1W9 429 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 G3V4G9 280 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 ETV2O00321 342 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-209ENST00000469511 PPIHO43447 177 aaKnown RBP4.5□□□□□ -1.69
PTPN4-209ENST00000469511 CDC14BO60729 498 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 RP2O75695 350 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 KRT34O76011 436 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 IGLV1-44P01699 117 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 TFPIP10646 304 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 NPR2P20594 1047 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 PCMT1P22061 227 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 CRABP2P29373 138 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 GCH1P30793 250 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 PCGF2P35227 344 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 HSD17B3P37058 310 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 MAGEB1P43366 347 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 KHKP50053 298 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 CCR4P51679 360 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 SLC16A1P53985 500 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 FOXA1P55317 472 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 MYBPC1Q00872 1141 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 ROM1Q03395 351 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 HEPACAMQ14CZ8 416 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 PDK3Q15120 406 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 SLC9A3R2Q15599 337 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 MLANAQ16655 118 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 ALKBH6Q3KRA9 238 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 UNC50Q53HI1 259 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 KRT80Q6KB66 452 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 C3orf62Q6ZUJ4 267 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 DOK3Q7L591 496 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 SSX8Q7RTT4 187 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 HMGN2P46Q86SG4 172 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 RIBC1Q8N443 379 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-209ENST00000469511 ZNF614Q8N883 585 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 LINC00482Q8N8I6 264 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 OR1K1Q8NGR3 316 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 OR6Y1Q8NGX8 325 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 NANPQ8TBE9 248 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 ACTRT1Q8TDG2 376 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 BCL2L2Q92843 193 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-209ENST00000469511 TMIGD2Q96BF3 282 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms