RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 OFCC1Q8IZS5 231 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 TEX47Q8TBZ9 253 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 C3orf49Q96BT1 292 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 C1GALT1C1Q96EU7 318 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 MNTQ99583 582 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 FNDC11Q9BVV2 318 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 TTTY12Q9BZ98 90 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 UBQLN3Q9H347 655 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 HHATLQ9HCP6 504 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 DIABLOQ9NR28 239 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 MAN2C1Q9NTJ4 1040 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ACER3Q9NUN7 267 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 MED17Q9NVC6 651 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 RPS6KB2Q9UBS0 482 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 DNAJB9Q9UBS3 223 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 RIMS3Q9UJD0 308 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 LYVE1Q9Y5Y7 322 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 CEPT1Q9Y6K0 416 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 IGSF10Q6WRI0 2623 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 SHISA8B8ZZ34 492 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 INMTO95050 263 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 GADD45GO95257 159 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 NTN1O95631 604 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 LDLRP01130 860 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 H1F0P07305 194 aaKnown RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 DBTP11182 482 aaKnown RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 DPP4P27487 766 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 NR1H2P55055 460 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 DSCR4P56555 118 aaPredicted RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 FOXK1P85037 733 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 PMP22Q01453 160 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 ST3GAL3Q11203 375 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 LAPTM4AQ15012 233 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 PLPPR5Q32ZL2 321 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 FGD3Q5JSP0 725 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 COLEC12Q5KU26 742 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 POMZP3Q6PJE2 187 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 NKAIN4Q8IVV8 208 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 PM20D2Q8IYS1 436 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 ZFP62Q8NB50 900 aaPredicted RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 ICA1LQ8NDH6 482 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 C9orf43Q8TAL5 461 aaPredicted RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 SLC7A13Q8TCU3 470 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 BDH2Q9BUT1 245 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 C9orf16Q9BUW7 83 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 POLR2J2Q9GZM3 115 aaKnown RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 POLR2J3Q9H1A7 115 aaKnown RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF703Q9H7S9 590 aaPredicted RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 REEP1Q9H902 201 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 MALT1Q9UDY8 824 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 ENOPH1Q9UHY7 261 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 RPH3AQ9Y2J0 694 aaPredicted RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 SAMHD1Q9Y3Z3 626 aaKnown RBP6.21□□□□□ -1.41
SCAF4-204ENST00000467731 GTF3C1Q12789 2109 aa6.21□□□□□ -1.41
SCAF4-204ENST00000467731 TRBV4-1A0A0J9YWV2 114 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 SH3D21A4FU49 640 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 FAM166BA8MTA8 275 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 CHP2O43745 196 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 DPM1O60762 260 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 GP1BBP13224 206 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 GDF1P27539 372 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TACR3P29371 465 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 MAGEA5P43359 124 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 LSM11P83369 360 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 PLGLB1Q02325 96 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 FOXF1Q12946 379 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 DGCR6Q14129 220 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 PDK3Q15120 406 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ULK3Q6PHR2 472 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 UGT2A3Q6UWM9 527 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 WDR88Q6ZMY6 472 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM179BQ7Z7N9 219 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 MINDY2Q8NBR6 621 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 PIK3C3Q8NEB9 887 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 OR5M1Q8NGP8 315 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 DNAJA4Q8WW22 397 aaPredicted RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM234Q8WY98 164 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ST8SIA1Q92185 356 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 CENPNQ96H22 339 aaPredicted RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 PRSS27Q9BQR3 290 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ADAM19Q9H013 955 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TUBD1Q9UJT1 453 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 OSGIN1Q9UJX0 560 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 DKKL1Q9UK85 242 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ERGIC3Q9Y282 383 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ZFYVE26Q68DK2 2539 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TNFRSF11BO00300 401 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ETV2O00321 342 aaPredicted RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ZIC3O60481 467 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TRAPPC6AO75865 159 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 GLSO94925 669 aaPredicted RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 LYPD3O95274 346 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF23P17027 643 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ATF4P18848 351 aaPredicted RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 SRD5A2P31213 254 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 RAC1P63000 192 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 MERTKQ12866 999 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 EXOC3L2Q2M3D2 409 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 RNFT1Q5M7Z0 435 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms