RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 ADGRG3Q86Y34 549 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 BPIFB6Q8NFQ5 453 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 POC1BQ8TC44 478 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 RORBQ92753 470 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 SLC41A3Q96GZ6 507 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 GPR137Q96N19 417 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 BBC3Q96PG8 261 aaPredicted RBP13.32□□□□□ -0.28
DDX56-208ENST00000467318 RIBC2Q9H4K1 309 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 ANKRD19PQ9H560 264 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 DUSP21Q9H596 190 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 CTPS2Q9NRF8 586 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 CHRNA9Q9UGM1 479 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 WARS2Q9UGM6 360 aaKnown RBP13.32□□□□□ -0.28
DDX56-208ENST00000467318 SPIN1Q9Y657 262 aaPredicted RBP13.32□□□□□ -0.28
DDX56-208ENST00000467318 U3KQV3 271 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 NCKAP5O14513 1909 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 FREM3P0C091 2139 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 A0A087WUJ7 227 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 J3KTA2 159 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 FFAR1O14842 300 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ADAMDEC1O15204 470 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ACTL6AO96019 429 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ZNF12P17014 697 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ENTPD1P49961 510 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 SMIM11AP58511 58 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 RAC1P63000 192 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 SELENBP1Q13228 472 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 FGD3Q5JSP0 725 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 C3orf33Q6P1S2 294 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ARHGAP11AQ6P4F7 1023 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 FAHD1Q6P587 224 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 GHDCQ8N2G8 530 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 SLC25A43Q8WUT9 341 aaPredicted RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 TRUB1Q8WWH5 349 aaKnown RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 SLX1AQ9BQ83 275 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 TSPAN10Q9H1Z9 355 aaPredicted RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 SLC6A15Q9H2J7 730 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 EXO5Q9H790 373 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 NMNAT1Q9HAN9 279 aaPredicted RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 ASF1BQ9NVP2 202 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ENPP5Q9UJA9 477 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 NDRG4Q9ULP0 352 aaKnown RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 SLC7A7Q9UM01 511 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ZNF337Q9Y3M9 751 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 TMED7-TICAM2A0A0A6YYA0 188 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 A0A1W2PRQ8 180 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ELOA3DA6NLF2 546 aaPredicted RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 GJE1A6NN92 205 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 PTGES3LE9PB15 166 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ZNF208O43345 1280 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 CLPXO76031 633 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 WISP2O76076 250 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 PCMT1P22061 227 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 TCEA1P23193 301 aaKnown RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 FOXK1P85037 733 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 DGCR6Q14129 220 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ELOA3BQ3SY89 546 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 GDF7Q7Z4P5 450 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ZNF605Q86T29 641 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ATG16L2Q8NAA4 619 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ELOA3Q8NG57 546 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 OR5M1Q8NGP8 315 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 RNF217Q8TC41 542 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ABTB1Q969K4 478 aaPredicted RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 PITX2Q99697 317 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 NPAS1Q99742 590 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 NAA50Q9GZZ1 169 aaKnown RBP13.31□□□□□ -0.28
DDX56-208ENST00000467318 VNN3Q9NY84 501 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 ENOPH1Q9UHY7 261 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 TMED7Q9Y3B3 224 aa13.31□□□□□ -0.28
DDX56-208ENST00000467318 PRRC2CQ9Y520 2896 aaKnown RBP13.3□□□□□ -0.28
DDX56-208ENST00000467318 OR14I1A6ND48 311 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 SHISA8B8ZZ34 492 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 AQP7O14520 342 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 SLC22A1O15245 554 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 DIRAS1O95057 198 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 THY1P04216 161 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 H1F0P07305 194 aaKnown RBP13.3□□□□□ -0.28
DDX56-208ENST00000467318 PEPDP12955 493 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 ANXA8P13928 327 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 CLK1P49759 484 aaKnown RBP13.3□□□□□ -0.28
DDX56-208ENST00000467318 PPP1R8Q12972 351 aaKnown RBP13.3□□□□□ -0.28
DDX56-208ENST00000467318 TRAM2Q15035 370 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 VASNQ6EMK4 673 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 LAIR2Q6ISS4 152 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 POMZP3Q6PJE2 187 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 C5orf46Q6UWT4 87 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 LINC00114Q6XXX2 140 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 Q6ZNX1 250 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 CPT1CQ8TCG5 803 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 SARAFQ96BY9 339 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 DHRS1Q96LJ7 313 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 HS6ST2Q96MM7 605 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 ZNF426Q9BUY5 554 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 FUNDC2Q9BWH2 189 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 CCDC90BQ9GZT6 254 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 GALNT8Q9NY28 637 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 SLC6A5Q9Y345 797 aa13.3□□□□□ -0.28
DDX56-208ENST00000467318 LIPGQ9Y5X9 500 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms