RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 POLE3Q9NRF9 147 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 MAT2BQ9NZL9 334 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 WNT16Q9UBV4 365 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 SPATA2Q9UM82 520 aa13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 MRPS2Q9Y399 296 aaKnown RBP13.52□□□□□ -0.24
PRPF38B-204ENST00000467302 MEIKINA0A087WXM9 373 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 A0A1W2PPK0 400 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 CYR61O00622 381 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 GPR171O14626 319 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 MAGEB4O15481 346 aaPredicted RBP13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 ARL6IP5O75915 188 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 IFNGP01579 166 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 CD1AP06126 327 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 CT62P0C5K7 136 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 SLC6A6P31641 620 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 GABRA3P34903 492 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 RBM34P42696 430 aaKnown RBP13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 GDI2P50395 445 aaKnown RBP13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 POU6F2P78424 691 aaPredicted RBP13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 GGTLC2Q14390 218 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 EXOSC7Q15024 291 aaKnown RBP13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 ST3GAL2Q16842 350 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 SLC22A10Q63ZE4 541 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 ESPNLQ6ZVH7 1005 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 OVCH1Q7RTY7 1134 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 PRSS41Q7RTY9 318 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 ARL14Q8N4G2 192 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 CADM4Q8NFZ8 388 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 SMIM4Q8WVI0 70 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 HOXB13Q92826 284 aaPredicted RBP13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 CTHRC1Q96CG8 243 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 SORCS2Q96PQ0 1159 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 FOXQ1Q9C009 403 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 BRD7Q9NPI1 651 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 CHRNA9Q9UGM1 479 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 PCDHGA9Q9Y5G4 932 aaKnown RBP13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 PRUNE2Q8WUY3 3088 aa13.52□□□□□ -0.25
PRPF38B-204ENST00000467302 TRIOBPQ9H2D6 2365 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 A0A1B0GVI7 797 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 A0A1W2PR77 199 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 ANKRD61A6NGH8 418 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 GATBO75879 557 aaKnown RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 GPR75O95800 540 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 WNT1P04628 370 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 SYPP08247 313 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 IFI6P09912 130 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 H2AFB2P0C5Z0 115 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 OR2T7P0C7T2 308 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 NME1P15531 152 aaKnown RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 CD38P28907 300 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 ACAA2P42765 397 aaKnown RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 PPP1CAP62136 330 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 ACTA2P62736 377 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 ACTG2P63267 376 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 SIRPAP78324 504 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 CAMK2DQ13557 499 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 ELOCQ15369 112 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 CDONQ4KMG0 1287 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 RNASE12Q5GAN4 147 aaKnown RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 CSNK1A1LQ8N752 337 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 OR2T27Q8NH04 317 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 ZMYND19Q96E35 227 aaPredicted RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 LRFN5Q96NI6 719 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 EVA1AQ9H8M9 152 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 POMT2Q9UKY4 750 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 MRPS7Q9Y2R9 242 aaKnown RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 SPACA6W5XKT8 324 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 ZNF593O00488 134 aaPredicted RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 SOX1O00570 391 aaPredicted RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 SHOXO15266 292 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 MT-ND4P03905 459 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 HIST1H1CP16403 213 aaKnown RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 GBX2P52951 348 aaPredicted RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 VSX2P58304 361 aaPredicted RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 SNTB2Q13425 540 aaKnown RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 COL28A1Q2UY09 1125 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 UNQ9370/PRO34162Q6UXP9 181 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 LINC00114Q6XXX2 140 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 FGD2Q7Z6J4 655 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 LUZP2Q86TE4 346 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 GRAMD2AQ8IUY3 354 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 POMGNT2Q8NAT1 580 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 FAM98AQ8NCA5 519 aaKnown RBP13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 OR52E2Q8NGJ4 325 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 OR56B4Q8NH76 319 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 GIMAP1Q8WWP7 306 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 CMTM3Q96MX0 182 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 PTCHD1Q96NR3 888 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 CCDC3Q9BQI4 270 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 TTTY10Q9BZA0 68 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 ACTR6Q9GZN1 396 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 SEMA6CQ9H3T2 930 aa13.51□□□□□ -0.25
PRPF38B-204ENST00000467302 DNAH14Q0VDD8 3507 aa13.5□□□□□ -0.25
PRPF38B-204ENST00000467302 SYNDIG1LA6NDD5 238 aa13.5□□□□□ -0.25
PRPF38B-204ENST00000467302 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.5□□□□□ -0.25
PRPF38B-204ENST00000467302 ZNF749O43361 778 aa13.5□□□□□ -0.25
PRPF38B-204ENST00000467302 NKX2-2O95096 273 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms