RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 NRIP3Q9NQ35 241 aa10.44□□□□□ -0.74
HPS1-208ENST00000467246 MALT1Q9UDY8 824 aa10.44□□□□□ -0.74
HPS1-208ENST00000467246 MKL2Q9ULH7 1088 aa10.44□□□□□ -0.74
HPS1-208ENST00000467246 EML5Q05BV3 1969 aa10.44□□□□□ -0.74
HPS1-208ENST00000467246 MPDZO75970 2070 aa10.44□□□□□ -0.74
HPS1-208ENST00000467246 OR6C68A6NDL8 312 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 FRG2CA6NGY1 282 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 PLPP2O43688 288 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 IDH3BO43837 385 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 SHC1P29353 583 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 AQP2P41181 271 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 RFX2P48378 723 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 NR0B1P51843 470 aaKnown RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 ARPC4P59998 168 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 RPS4XP62701 263 aaKnown RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 EGR4Q05215 589 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 EBPQ15125 230 aaKnown RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 TP53I3Q53FA7 332 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 WDR45BQ5MNZ6 344 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 XKRXQ6PP77 449 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 LYPD4Q6UWN0 246 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 TMPRSS9Q7Z410 1059 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 ZNF501Q96CX3 271 aaPredicted RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 TMCO6Q96DC7 493 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 DDOQ99489 341 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 DUSP15Q9H1R2 295 aaPredicted RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 MN1Q10571 1320 aaPredicted RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 FRYLO94915 3013 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 TFECO14948 347 aaPredicted RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 CSF3P09919 207 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 GALP22466 123 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 APEX1P27695 318 aaKnown RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 GPLD1P80108 840 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 MRPS15P82914 257 aaKnown RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 CNIH2Q6PI25 160 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 LANCL3Q6ZV70 420 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 SLITRK4Q8IW52 837 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 GPALPP1Q8IXQ4 340 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 DNAJA3Q96EY1 480 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 VN1R1Q9GZP7 353 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 ENAMQ9NRM1 1142 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 SEMA5BQ9P283 1151 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 CTSFQ9UBX1 484 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 FER1L5A0AVI2 2057 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 A0A1B0GX78 115 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 PNMTP11086 282 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 DAB2P98082 770 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 LTBQ06643 244 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 POU4F2Q12837 409 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 ZNF74Q16587 644 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 PYDC2Q56P42 97 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 MARCH3Q86UD3 253 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 CARFQ8N187 725 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 IL17RDQ8NFM7 739 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 OR13C5Q8NGS8 318 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 ZNF563Q8TA94 476 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 ABHD4Q8TB40 342 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 CCDC74AQ96AQ1 378 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 PGLYRP3Q96LB9 341 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 Q96M85 177 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 MESP1Q9BRJ9 268 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 SLC19A3Q9BZV2 496 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 KCNN2Q9H2S1 579 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 COQ3Q9NZJ6 369 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 KLHL21Q9UJP4 597 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 ATXN7L1Q9ULK2 861 aaPredicted RBP10.43□□□□□ -0.74
HPS1-208ENST00000467246 DMDP11532 3685 aa10.43□□□□□ -0.74
HPS1-208ENST00000467246 CFAP54Q96N23 3096 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 CACNA1EQ15878 2313 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 MUC3AQ02505 3323 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 ALPK2Q86TB3 2170 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 FAM171A2A8MVW0 826 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 ARPC3O15145 178 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 SELENOFO60613 162 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 WISP1O95388 367 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 TACR3P29371 465 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 PPP3R1P63098 170 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 ACTC1P68032 377 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 ACTA1P68133 377 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 ZNF117Q03924 483 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 PON3Q15166 354 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 P2RY14Q15391 338 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 TOMM34Q15785 309 aaPredicted RBP10.42□□□□□ -0.74
HPS1-208ENST00000467246 CEACAM19Q7Z692 300 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 SLC38A6Q8IZM9 456 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 OR6K6Q8NGW6 343 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 GHSRQ92847 366 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 KTI12Q96EK9 354 aaPredicted RBP10.42□□□□□ -0.74
HPS1-208ENST00000467246 CNN2Q99439 309 aaKnown RBP10.42□□□□□ -0.74
HPS1-208ENST00000467246 ELF4Q99607 663 aaPredicted RBP10.42□□□□□ -0.74
HPS1-208ENST00000467246 MMP25Q9NPA2 562 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 EXOSC3Q9NQT5 275 aaKnown RBP10.42□□□□□ -0.74
HPS1-208ENST00000467246 NANSQ9NR45 359 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 ZNF346Q9UL40 294 aaKnown RBP10.42□□□□□ -0.74
HPS1-208ENST00000467246 SIT1Q9Y3P8 196 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 TP53BP1Q12888 1972 aaPredicted RBP10.42□□□□□ -0.74
HPS1-208ENST00000467246 IGHV3-20A0A0C4DH32 117 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 TEX13CA0A0J9YWL9 993 aa10.42□□□□□ -0.74
HPS1-208ENST00000467246 KHNYNO15037 678 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms