RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TMEM45BQ96B21 275 aa10.56□□□□□ -0.72
UBR4-210ENST00000466969 ZNF837Q96EG3 531 aaPredicted RBP10.56□□□□□ -0.72
UBR4-210ENST00000466969 ALKBH3Q96Q83 286 aaPredicted RBP10.56□□□□□ -0.72
UBR4-210ENST00000466969 TRIM5Q9C035 493 aa10.56□□□□□ -0.72
UBR4-210ENST00000466969 EQTNQ9NQ60 294 aa10.56□□□□□ -0.72
UBR4-210ENST00000466969 NUDT4Q9NZJ9 180 aa10.56□□□□□ -0.72
UBR4-210ENST00000466969 SLC12A4Q9UP95 1085 aa10.56□□□□□ -0.72
UBR4-210ENST00000466969 ACOT9Q9Y305 439 aa10.56□□□□□ -0.72
UBR4-210ENST00000466969 SPIN1Q9Y657 262 aaPredicted RBP10.56□□□□□ -0.72
UBR4-210ENST00000466969 USH1CQ9Y6N9 552 aa10.56□□□□□ -0.72
UBR4-210ENST00000466969 KIAA1109Q2LD37 5005 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 SUPT3HB4E1H0 165 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 TNFRSF13BO14836 293 aaPredicted RBP10.55□□□□□ -0.72
UBR4-210ENST00000466969 SUPT3HO75486 399 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 JUNP05412 331 aaKnown RBP10.55□□□□□ -0.72
UBR4-210ENST00000466969 IL3P08700 152 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 BCKDHAP12694 445 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 MAGEA3P43357 314 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 IER3P46695 156 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 PTDSS1P48651 473 aaKnown RBP10.55□□□□□ -0.72
UBR4-210ENST00000466969 CCR4P51679 360 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 SH3BGRP55822 239 aaPredicted RBP10.55□□□□□ -0.72
UBR4-210ENST00000466969 PCBP3P57721 371 aaKnown RBP10.55□□□□□ -0.72
UBR4-210ENST00000466969 OR2B6P58173 313 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 CBFBQ13951 182 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 CLEC6AQ6EIG7 209 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 SLC35E4Q6ICL7 350 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 DRICH1Q6PGQ1 229 aaPredicted RBP10.55□□□□□ -0.72
UBR4-210ENST00000466969 ZAR1Q86SH2 424 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 MDP1Q86V88 176 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 CMIPQ8IY22 773 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 UBTD2Q8WUN7 234 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 NEURL3Q96EH8 262 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 NAA11Q9BSU3 229 aaPredicted RBP10.55□□□□□ -0.72
UBR4-210ENST00000466969 NELFAQ9H3P2 528 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 NANOGQ9H9S0 305 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 IFNKQ9P0W0 207 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 KIF17Q9P2E2 1029 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 NPTNQ9Y639 398 aa10.55□□□□□ -0.72
UBR4-210ENST00000466969 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
UBR4-210ENST00000466969 SLC22A23A1A5C7 686 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 BTBD17A6NE02 478 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 ANKRD61A6NGH8 418 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 ETV2O00321 342 aaPredicted RBP10.54□□□□□ -0.72
UBR4-210ENST00000466969 MFAP3LO75121 409 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 KCNK2O95069 426 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 MT-ND5P03915 603 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 TPM3P06753 285 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 MAKP20794 623 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 UQCRC2P22695 453 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 ETV4P43268 484 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 KCNJ1P48048 391 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 SLC35A2P78381 396 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 GALNT1Q10472 559 aaPredicted RBP10.54□□□□□ -0.72
UBR4-210ENST00000466969 MERTKQ12866 999 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 SLC17A1Q14916 467 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 HEPACAMQ14CZ8 416 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 ZC3HC1Q86WB0 502 aaKnown RBP10.54□□□□□ -0.72
UBR4-210ENST00000466969 SYCE1Q8N0S2 351 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 KLHDC1Q8N7A1 406 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 L3MBTL4Q8NA19 623 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 CPEB3Q8NE35 698 aaKnown RBP10.54□□□□□ -0.72
UBR4-210ENST00000466969 OR5W2Q8NH69 310 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 DPF1Q92782 380 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 ZNF524Q96C55 264 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 FRG2BQ96QU4 278 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 SLCO1C1Q9NYB5 712 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 HDGFL3Q9Y3E1 203 aa10.54□□□□□ -0.72
UBR4-210ENST00000466969 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 EIF1BO60739 113 aaKnown RBP10.53□□□□□ -0.72
UBR4-210ENST00000466969 NKX2-2O95096 273 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 DUS4LO95620 317 aaKnown RBP10.53□□□□□ -0.72
UBR4-210ENST00000466969 IFNW1P05000 195 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 ZNF35P13682 527 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 HOXD3P31249 432 aaPredicted RBP10.53□□□□□ -0.72
UBR4-210ENST00000466969 LSP1P33241 339 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 RPL4P36578 427 aaKnown RBP10.53□□□□□ -0.72
UBR4-210ENST00000466969 SERPINB4P48594 390 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 KLF3P57682 345 aaPredicted RBP10.53□□□□□ -0.72
UBR4-210ENST00000466969 EGFEM1PQ0D2K5 195 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 IFT88Q13099 833 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 FXNQ16595 210 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 NDUFAF6Q330K2 333 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 FAM209AQ5JX71 171 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 NKAPLQ5M9Q1 402 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 RGS7BPQ6MZT1 257 aaPredicted RBP10.53□□□□□ -0.72
UBR4-210ENST00000466969 SPERTQ8NA61 448 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 SDR9C7Q8NEX9 313 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 STAG3L4Q8TBR4 150 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 RAB40AQ8WXH6 277 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 GATAD2BQ8WXI9 593 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 DCLRE1CQ96SD1 692 aaKnown RBP10.53□□□□□ -0.72
UBR4-210ENST00000466969 SHCBP1LQ9BZQ2 653 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 IPPKQ9H8X2 491 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 ACOXLQ9NUZ1 547 aa10.53□□□□□ -0.72
UBR4-210ENST00000466969 SERTM1A2A2V5 107 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 RNASEK-C17orf49H0YIS7 233 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 UBXN8O00124 270 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 ANGPTL7O43827 346 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 HSPA4LO95757 839 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms