RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 HLCSP50747 726 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 KPNA2P52292 529 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 STX17P56962 302 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 ACTR3P61158 418 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 CDK16Q00536 496 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 GNMTQ14749 295 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 CCDC14Q49A88 953 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 GPRC6AQ5T6X5 926 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 OTPQ5XKR4 325 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR52E8Q6IFG1 317 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 NUDCD3Q8IVD9 361 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 UBE2J2Q8N2K1 259 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR10G3Q8NGC4 313 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR1L4Q8NGR5 311 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 LINC01006Q8NI28 216 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 SETD7Q8WTS6 366 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 PHYHIPLQ96FC7 376 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 OXGR1Q96P68 337 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 TECTBQ96PL2 329 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 P2RY13Q9BPV8 354 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 AIG1Q9NVV5 245 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 SUN2Q9UH99 717 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 NAP1L2Q9ULW6 460 aaPredicted RBP3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 STAP1Q9ULZ2 295 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 ABCG2Q9UNQ0 655 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 ASF1AQ9Y294 204 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 THSD7BQ9C0I4 1608 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR5B21A6NL26 309 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 KLLNB2CW77 178 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 HAS3O00219 553 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 ZNF780AO75290 641 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 OXSR1O95747 527 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 RBMY1CP0DJD4 496 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 COX7A1P24310 79 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 PBLDP30039 288 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 SHMT2P34897 504 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 TAGLN2P37802 199 aaKnown RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 GLP1RP43220 463 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 ARRB1P49407 418 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 GPM6AP51674 278 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 APOC4P55056 127 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 TIMM10P62072 90 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR5I1Q13606 314 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 RNF212Q495C1 297 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 MARCH8Q5T0T0 291 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 CASC10Q5T4H9 136 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 PRAMEF5Q5TYX0 476 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 PRAMEF6Q5VXH4 476 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 TIGD3Q6B0B8 471 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 TMIGD1Q6UXZ0 262 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 PGAP1Q75T13 922 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 ECHDC2Q86YB7 292 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 RDH10Q8IZV5 341 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR2L5Q8NG80 312 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 TUBGCP3Q96CW5 907 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 TCEANC2Q96MN5 208 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 ZNF641Q96N77 438 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 CNN2Q99439 309 aaKnown RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 MRPL45Q9BRJ2 306 aaKnown RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 RIOK1Q9BRS2 568 aaKnown RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 ROPN1BQ9BZX4 212 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 C20orf85Q9H1P6 137 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 ANKRD19PQ9H560 264 aa3.09□□□□□ -1.91
CDC42BPA-211ENST00000466538 A0A0J9YXY3 114 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 A0A1B0GVY2 172 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 A0A1W2PPE3 182 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 A6NIZ1 184 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 GFYI3L273 518 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 FOXE1O00358 373 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 ABCD4O14678 606 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZNF853P0CG23 659 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 CMA1P23946 247 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 HSD17B2P37059 387 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 RAP1BP61224 184 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 SELENOTP62341 195 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 BST1Q10588 318 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 MRPL28Q13084 256 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 ARFRP1Q13795 201 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZNF77Q15935 545 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 DGUOKQ16854 277 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 BOLA3Q53S33 107 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR2G6Q5TZ20 316 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZNF544Q6NX49 715 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 ENPP6Q6UWR7 440 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZNF571Q7Z3V5 609 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 EGFL6Q8IUX8 553 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 ERI1Q8IV48 349 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 C6orf223Q8N319 242 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR9K2Q8NGE7 335 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 FRAT1Q92837 279 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 FGF11Q92914 225 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 UCN3Q969E3 161 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 KCNA7Q96RP8 456 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 PLIN2Q99541 437 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 CHRDL1Q9BU40 450 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 TRIM62Q9BVG3 475 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 MFFQ9GZY8 342 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 PPA2Q9H2U2 334 aa3.08□□□□□ -1.92
CDC42BPA-211ENST00000466538 NARFLQ9H6Q4 476 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms