RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	NAA20	P61599	178 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	XIAP	P98170	497 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TFAM	Q00059	246 aa	Known RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FLI1	Q01543	452 aa	Predicted RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TLE4	Q04727	773 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GLO1	Q04760	184 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CDH17	Q12864	832 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GPR17	Q13304	367 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LASP1	Q14847	261 aa	Known RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ISX	Q2M1V0	245 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SMU1	Q2TAY7	513 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZNF699	Q32M78	642 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	C2CD6	Q53TS8	623 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SLC25A53	Q5H9E4	307 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	C1orf185	Q5T7R7	199 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TRAT1	Q6PIZ9	186 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TMEM270	Q6UE05	265 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LCLAT1	Q6UWP7	414 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RTL4	Q6ZR62	310 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MSANTD1	Q6ZTZ1	278 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FAM122B	Q7Z309	247 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TAF8	Q7Z7C8	310 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TPRA1	Q86W33	373 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZFAND4	Q86XD8	727 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ERI1	Q8IV48	349 aa	Known RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KIF2B	Q8N4N8	673 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	EID2	Q8N6I1	236 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OR6Q1	Q8NGQ2	317 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OR13C3	Q8NGS6	347 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PSMA8	Q8TAA3	256 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	URGCP	Q8TCY9	931 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ACTRT1	Q8TDG2	376 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GIPC3	Q8TF64	312 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KCTD4	Q8WVF5	259 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CAPSL	Q8WWF8	208 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HPSE2	Q8WWQ2	592 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NSMAF	Q92636	917 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GTF3A	Q92664	365 aa	Known RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TMEM80	Q96HE8	168 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HPDL	Q96IR7	371 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZNF641	Q96N77	438 aa	Predicted RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SERPINB12	Q96P63	405 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	C17orf62	Q9BQA9	187 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MGME1	Q9BQP7	344 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ELOVL4	Q9GZR5	314 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HOXD1	Q9GZZ0	328 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	THAP2	Q9H0W7	228 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FN3K	Q9H479	309 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LRRC40	Q9H9A6	602 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	S100A14	Q9HCY8	104 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	UFSP2	Q9NUQ7	469 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CMTM6	Q9NX76	183 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ELOVL2	Q9NXB9	296 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SPHK1	Q9NYA1	384 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TXNDC16	Q9P2K2	825 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	STUB1	Q9UNE7	303 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PIN4	Q9Y237	131 aa	Known RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PRELID3B	Q9Y3B1	194 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PPIL1	Q9Y3C6	166 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MFHAS1	Q9Y4C4	1052 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HES2	Q9Y543	173 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ASB4	Q9Y574	426 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SAR1B	Q9Y6B6	198 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RNF103-CHMP3	A0A140T963	221 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TMEM120B	A0PK00	339 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GMNC	A6NCL1	334 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ARL5C	A6NH57	179 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CASTOR2	A6NHX0	329 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OR6C70	A6NIJ9	312 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CCT8L1P	A6NM43	557 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SIGLEC16	A6NMB1	481 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KPNA7	A9QM74	516 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HHLA1	C9JL84	531 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KPNA4	O00629	521 aa	Predicted RBP	4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ADAM12	O43184	909 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PHF1	O43189	567 aa	Predicted RBP	4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	BCAS1	O75363	584 aa	Predicted RBP	4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PNP	P00491	289 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ANXA5	P08758	320 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TFPT	P0C1Z6	253 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FAM157C	P0CG43	387 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	IGHV4-31	P0DP07	118 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RAB3A	P20336	220 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TCEA1	P23193	301 aa	Known RBP	4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CA6	P23280	308 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ANOS1	P23352	680 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CXCR2	P25025	360 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SERPINB1	P30740	379 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CCR1	P32246	355 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SERPINB5	P36952	375 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MDH1	P40925	334 aa	Known RBP	4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	YAP1	P46937	504 aa	Known RBP	4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TAF6	P49848	677 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PRRX1	P54821	245 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OSTN	P61366	133 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SKP1	P63208	163 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	C2orf54	Q08AI8	447 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RASGEF1B	Q0VAM2	473 aa		4.35	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DGCR6	Q14129	220 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms