RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ZNF19P17023 458 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 HMGB2P26583 209 aaKnown RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 UGT1A5P35504 534 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 CCT3P49368 545 aaKnown RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 BIDP55957 195 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 BASP1P80723 227 aaKnown RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 NDPQ00604 133 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 DR1Q01658 176 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 KLRB1Q12918 225 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 ARFRP1Q13795 201 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 SLC15A2Q16348 729 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 IMMTQ16891 758 aaKnown RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 CCDC14Q49A88 953 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 SFT2D3Q587I9 215 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 KLF17Q5JT82 389 aaPredicted RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 SAMD4BQ5PRF9 694 aaKnown RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 C1orf146Q5VVC0 180 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 C11orf71Q6IPW1 123 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 FAM220AQ7Z4H9 259 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 SH2D6Q7Z4S9 175 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 C10orf67Q8IYJ2 551 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 ZNF679Q8IYX0 411 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 LRRC75A-AS1Q8N1F1 130 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 FTMTQ8N4E7 242 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 MFSD9Q8NBP5 474 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 FAM81AQ8TBF8 368 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 NRBF2Q96F24 287 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 C8orf76Q96K31 380 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 IMMP1LQ96LU5 166 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 ZIM3Q96PE6 472 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 PSKH2Q96QS6 385 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 COPS8Q99627 209 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 UQCC2Q9BRT2 126 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 SPZ1Q9BXG8 430 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 PARD6BQ9BYG5 372 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 TRIM4Q9C037 500 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 RBKSQ9H477 322 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 NARFLQ9H6Q4 476 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 NHEJ1Q9H9Q4 299 aaPredicted RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 PDFQ9HBH1 243 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 PLGRKTQ9HBL7 147 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 BATF3Q9NR55 127 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 TREM2Q9NZC2 230 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 COX16Q9P0S2 106 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 PAIP2BQ9ULR5 123 aaKnown RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 TMCO1Q9UM00 188 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 CLEC4AQ9UMR7 237 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 RPL36Q9Y3U8 105 aaKnown RBP2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 UGT2A1Q9Y4X1 527 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 GAKO14976 1311 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 SH3TC1Q8TE82 1336 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 MAPK8IP3Q9UPT6 1336 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 PNPLA6Q8IY17 1366 aa2.6□□□□□ -1.99
HMGXB4-205ENST00000464480 ARPC4-TTLL3A0A0A6YYG9 625 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 A0A0J9YXY3 114 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 IQANK1A0A1B0GTG1 560 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 DCTN6O00399 190 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 RIPK2O43353 540 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 EMC8O43402 210 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 HCRTR1O43613 425 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 PRKAB2O43741 272 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 NMT2O60551 498 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 RAMP3O60896 148 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 ZNF189O75820 626 aaPredicted RBP2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 TIMP1P01033 207 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 DNAH10OSP0CZ25 163 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 IDO1P14902 403 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 PCMT1P22061 227 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 SHMT2P34897 504 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 CCT6AP40227 531 aaKnown RBP2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 PTGDSP41222 190 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 CRYBB1P53674 252 aaPredicted RBP2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 AIF1P55008 147 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 UBE2HP62256 183 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 CTAG1AP78358 180 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 CSNK1G2P78368 415 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 TNFRSF17Q02223 184 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 PPP1R7Q15435 360 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 KLHL38Q2WGJ6 581 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 NSUN5P1Q3KNT7 163 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 C1orf220Q5T0J3 134 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 OTPQ5XKR4 325 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 THOC7Q6I9Y2 204 aaKnown RBP2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 OR4F3Q6IEY1 312 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 HSDL2Q6YN16 418 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 PGAP1Q75T13 922 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 UTS2BQ765I0 119 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 TGIF2LYQ8IUE0 185 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 ERI1Q8IV48 349 aaKnown RBP2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 ZCCHC7Q8N3Z6 543 aaKnown RBP2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 TRIML2Q8N7C3 387 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 CCDC71LQ8N9Z2 235 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 BHLHE23Q8NDY6 225 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 CATSPER1Q8NEC5 780 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 OR5D13Q8NGL4 314 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 C7orf33Q8WU49 177 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 CXorf40BQ96DE9 158 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 HIST1H4GQ99525 98 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 ZBTB18Q99592 522 aa2.59□□□□□ -1.99
HMGXB4-205ENST00000464480 ARHGDIGQ99819 225 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms