RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TRMT5Q32P41 509 aaKnown RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF766Q5HY98 468 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 CCNJQ5T5M9 372 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 TNFAIP8L2Q6P589 184 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PAPD4Q6PIY7 484 aaKnown RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF621Q6ZSS3 439 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 FAM57BQ71RH2 274 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 MEPCEQ7L2J0 689 aaKnown RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 TMEM200AQ86VY9 491 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 CALHM3Q86XJ0 350 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 C9orf40Q8IXQ3 194 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PRR22Q8IZ63 422 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 DEFB107AQ8IZN7 70 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 FAM9CQ8IZT9 166 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 EID3Q8N140 333 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 OR2L13Q8N349 312 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 LRRC25Q8N386 305 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 APCDD1LQ8NCL9 501 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 MDS2Q8NDY4 140 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 OR52R1Q8NGF1 315 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 OR10Q1Q8NGQ4 319 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 GOT1L1Q8NHS2 421 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 SLC2A12Q8TD20 617 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 WDR60Q8WVS4 1066 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 OR5P2Q8WZ92 322 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PIK3R3Q92569 461 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 AKAP1Q92667 903 aaKnown RBP eCLIP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 MTERF3Q96E29 417 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 SCMH1Q96GD3 660 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ANKRD27Q96NW4 1050 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 OR1F2PQ96R84 312 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PANX1Q96RD7 426 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 BBS4Q96RK4 519 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 WFDC6Q9BQY6 131 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 SLC35A5Q9BS91 424 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 FAIM2Q9BWQ8 316 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ITPAQ9BY32 194 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 RTN4RQ9BZR6 473 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 UCK2Q9BZX2 261 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ROGDIQ9GZN7 287 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PCDHAC1Q9H158 963 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 WDR41Q9HAD4 459 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 TPT1P8Q9HAU6 139 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 MOV10Q9HCE1 1003 aaKnown RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 ADAP2Q9NPF8 381 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 KCNJ16Q9NPI9 418 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 PFDN4Q9NQP4 134 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 RASSF1Q9NS23 344 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 COQ3Q9NZJ6 369 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 LEF1Q9UJU2 399 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-204ENST00000463622 NPIPA1Q9UND3 350 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 CDC14AQ9UNH5 594 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 SNX8Q9Y5X2 465 aa3.26□□□□□ -1.89
SCFD1-204ENST00000463622 NSG1A0A0A6YYJ2 146 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 IGLV5-39A0A0G2JS06 123 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 TMEM272A0A1B0GTI8 110 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 SAGE2PA6NJ88 616 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF814B7Z6K7 855 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 PLOD2O00469 737 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 HMGN4O00479 90 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 EBAG9O00559 213 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 SLC22A2O15244 555 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 COQ9O75208 318 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 EPPINO95925 133 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 TOMM40O96008 361 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 F10P00742 488 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 IFNA16P05015 189 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 HEXBP07686 556 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 CHRM4P08173 479 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 OR12D1P0DN82 309 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 TCN1P20061 433 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF10P21506 573 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 CHRNB4P30926 498 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 NTSP30990 170 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 CCT3P49368 545 aaKnown RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 THBS3P49746 956 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 GSK3BP49841 420 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 SLC37A1P57057 533 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 SLC26A5P58743 744 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 LIPEQ05469 1076 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 FUT7Q11130 342 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 STX4Q12846 297 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 EBPQ15125 230 aaKnown RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 RGNQ15493 299 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 SYPL1Q16563 259 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 ODF3L2Q3SX64 289 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 TMEM211Q6ICI0 200 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 MFSD12Q6NUT3 480 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 C9orf47Q6ZRZ4 202 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 SZRD1Q7Z422 152 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 C6orf120Q7Z4R8 191 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 R3HCC1LQ7Z5L2 792 aaKnown RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 CPEB2Q7Z5Q1 589 aaKnown RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 ST13P4Q8IZP2 240 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 PGAM4Q8N0Y7 254 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 GHDCQ8N2G8 530 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 FAM86B1Q8N7N1 296 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF441Q8N8Z8 693 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 ANKFN1Q8N957 763 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 OR10A6Q8NH74 314 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms