RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 COPZ1P61923 177 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 LARS2Q15031 903 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 ZSWIM7Q19AV6 140 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 MMEL1Q495T6 779 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 SEZ6L2Q6UXD5 910 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 CASP12Q6UXS9 341 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 ZNF836Q6ZNA1 936 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 VRK2Q86Y07 508 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 CCDC103Q8IW40 242 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 POU5F2Q8N7G0 328 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 LILRB1Q8NHL6 650 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 SMAP2Q8WU79 429 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 PAIP1Q9H074 479 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 ARMC7Q9H6L4 198 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 EFCAB1Q9HAE3 211 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 TAS2R16Q9NYV7 291 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 MALT1Q9UDY8 824 aa19.57■□□□□ 0.72
PDLIM7-206ENST00000463411 CDHR4A6H8M9 788 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 MRASO14807 208 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 PGM3O95394 542 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 IDUAP35475 653 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 MNAT1P51948 309 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 MVDP53602 400 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 RNF220Q5VTB9 566 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 HACD2Q6Y1H2 254 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 ATG4DQ86TL0 474 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 NEUROG1Q92886 237 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 NSL1Q96IY1 281 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 RAD21L1Q9H4I0 556 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 ALG2Q9H553 416 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 FAIMQ9NVQ4 179 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 RLIMQ9NVW2 624 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 PARPBPQ9NWS1 579 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 ZNF232Q9UNY5 417 aa19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 ZNF443Q9Y2A4 671 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 NIPBLQ6KC79 2804 aaeCLIP19.56■□□□□ 0.72
PDLIM7-206ENST00000463411 TRBV5-3A0A0A0MS03 114 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 DPRXA6NFQ7 191 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 THBS1P07996 1170 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 TFPTP0C1Z6 253 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 IMPDH2P12268 514 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 CALB2P22676 271 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 H3F3AP84243 136 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 FAPQ12884 760 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 ETFDHQ16134 617 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 TRMT5Q32P41 509 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 WBP2NLQ6ICG8 309 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 PAQR6Q6TCH4 344 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 KLHL17Q6TDP4 642 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 DLEU7Q6UYE1 221 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 CADM2Q8N3J6 435 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 SLC38A5Q8WUX1 472 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 RCN3Q96D15 328 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 AURKBQ96GD4 344 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 TMEM19Q96HH6 336 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 RADILQ96JH8 1075 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 TRIM2Q9C040 744 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 UPB1Q9UBR1 384 aa19.55■□□□□ 0.72
PDLIM7-206ENST00000463411 A0A0G2JPF8 293 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 HNRNPCL2B2RXH8 293 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 HNRNPCL3B7ZW38 293 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 ABCD4O14678 606 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 HNRNPCL1O60812 293 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 RAMP1O60894 148 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 UBOX5O94941 541 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 GPIP06744 558 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 SOD3P08294 240 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 DANCRP0C864 163 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 GKN3PP0CG01 181 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 HNRNPCL4P0DMR1 293 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 CDH11P55287 796 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 MAPK11Q15759 364 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 GTDC1Q4AE62 458 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 RPS26P11Q5JNZ5 115 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 OTUD3Q5T2D3 398 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 OR7E24Q6IFN5 339 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 TMEM108Q6UXF1 575 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 DHDDSQ86SQ9 333 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 OR52N5Q8NH56 324 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 ADAM19Q9H013 955 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 GID8Q9NWU2 228 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 CISD1Q9NZ45 108 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 NPAP1Q9NZP6 1156 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 MGAT4BQ9UQ53 548 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 IFT52Q9Y366 437 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 MAGED1Q9Y5V3 778 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 FLVCR1Q9Y5Y0 555 aa19.54■□□□□ 0.72
PDLIM7-206ENST00000463411 ZC3H12DA2A288 527 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 EBAG9O00559 213 aa19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 T-ENOLP0DO92 83 aa19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 PPIBP23284 216 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 NFYCQ13952 458 aa19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 TAPBPLQ9BX59 468 aa19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 SLAMF8Q9P0V8 285 aa19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 PCDHB14Q9Y5E9 798 aa19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 NSD1Q96L73 2696 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-206ENST00000463411 USF3Q68DE3 2245 aa19.52■□□□□ 0.72
PDLIM7-206ENST00000463411 OVOL3O00110 214 aa19.52■□□□□ 0.72
PDLIM7-206ENST00000463411 FXYD1O00168 92 aa19.52■□□□□ 0.72
PDLIM7-206ENST00000463411 PTAFRP25105 342 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms