RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 TRAP1Q12931 704 aaKnown RBP18.08■□□□□ 0.48
NUP43-205ENST00000463048 OTUD3Q5T2D3 398 aaPredicted RBP18.08■□□□□ 0.48
NUP43-205ENST00000463048 VWA1Q6PCB0 445 aa18.08■□□□□ 0.48
NUP43-205ENST00000463048 LINC00114Q6XXX2 140 aa18.08■□□□□ 0.48
NUP43-205ENST00000463048 MEX3DQ86XN8 651 aaKnown RBP18.08■□□□□ 0.48
NUP43-205ENST00000463048 PFN4Q8NHR9 129 aa18.08■□□□□ 0.48
NUP43-205ENST00000463048 ZNF300Q96RE9 604 aaPredicted RBP18.08■□□□□ 0.48
NUP43-205ENST00000463048 NAA11Q9BSU3 229 aaPredicted RBP18.08■□□□□ 0.48
NUP43-205ENST00000463048 TRIM15Q9C019 465 aa18.08■□□□□ 0.48
NUP43-205ENST00000463048 POLR2J2Q9GZM3 115 aaKnown RBP18.08■□□□□ 0.48
NUP43-205ENST00000463048 POLR2J3Q9H1A7 115 aaKnown RBP18.08■□□□□ 0.48
NUP43-205ENST00000463048 TESMINQ9Y4I5 508 aa18.08■□□□□ 0.48
NUP43-205ENST00000463048 WIPF3A6NGB9 483 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 EEF1E1-BLOC1S5C9J1V9 151 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 EEF1E1O43324 174 aaKnown RBP18.07■□□□□ 0.48
NUP43-205ENST00000463048 SMNDC1O75940 238 aaKnown RBP eCLIP18.07■□□□□ 0.48
NUP43-205ENST00000463048 CH25HO95992 272 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 IL1RL1Q01638 556 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 MTX3Q5HYI7 312 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 FGD3Q5JSP0 725 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 XKRXQ6PP77 449 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 ZDHHC21Q8IVQ6 265 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 TUSC5Q8IXB3 177 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 OR52J3Q8NH60 311 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 MPP4Q96JB8 637 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 MOGAT1Q96PD6 335 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 EPYCQ99645 322 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 TMEM43Q9BTV4 400 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 C12orf49Q9H741 205 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 AURKCQ9UQB9 309 aa18.07■□□□□ 0.48
NUP43-205ENST00000463048 USP9XQ93008 2570 aaPredicted RBP18.07■□□□□ 0.48
NUP43-205ENST00000463048 DVL2O14641 736 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 CYTIPO60759 359 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 CLDN14O95500 239 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 GRPRP30550 384 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 KIR2DL2P43627 348 aaPredicted RBP18.06■□□□□ 0.48
NUP43-205ENST00000463048 LSM11P83369 360 aaKnown RBP eCLIP18.06■□□□□ 0.48
NUP43-205ENST00000463048 SPIBQ01892 262 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 LTBQ06643 244 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 TRAM2Q15035 370 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 FAM69AQ5T7M9 428 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 GTF2IRD2BQ6EKJ0 949 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.06■□□□□ 0.48
NUP43-205ENST00000463048 BTLAQ7Z6A9 289 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 LUZP2Q86TE4 346 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 GPAT4Q86UL3 456 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 GTF2IRD2Q86UP8 949 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 OFCC1Q8IZS5 231 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 KDM8Q8N371 416 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 RELL2Q8NC24 303 aaPredicted RBP18.06■□□□□ 0.48
NUP43-205ENST00000463048 MFSD8Q8NHS3 518 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 TMEM239Q8WW34 195 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 GMPPAQ96IJ6 420 aaPredicted RBP18.06■□□□□ 0.48
NUP43-205ENST00000463048 ZFP3Q96NJ6 502 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 NMNAT1Q9HAN9 279 aaPredicted RBP18.06■□□□□ 0.48
NUP43-205ENST00000463048 MAN2C1Q9NTJ4 1040 aa18.06■□□□□ 0.48
NUP43-205ENST00000463048 ENO4A6NNW6 628 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 FTCDNL1E5RQL4 147 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 M0R082 166 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 EIF1BO60739 113 aaKnown RBP18.05■□□□□ 0.48
NUP43-205ENST00000463048 TNFSF13O75888 250 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 PRSS23O95084 383 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 BGLAPP02818 100 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 H1F0P07305 194 aaKnown RBP18.05■□□□□ 0.48
NUP43-205ENST00000463048 UMPSP11172 480 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 RHCEP18577 417 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 OPRM1P35372 400 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 CHRNB3Q05901 458 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 RNPS1Q15287 305 aaKnown RBP18.05■□□□□ 0.48
NUP43-205ENST00000463048 TMEM201Q5SNT2 666 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 TBPL2Q6SJ96 375 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 PAQR6Q6TCH4 344 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 C5orf46Q6UWT4 87 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 ASRGL1Q7L266 308 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 NUFIP2Q7Z417 695 aaKnown RBP18.05■□□□□ 0.48
NUP43-205ENST00000463048 SLC43A2Q8N370 569 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 LILRB4Q8NHJ6 448 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 ZNF417Q8TAU3 575 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 PIGXQ8TBF5 258 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 ZNF587Q96SQ5 575 aaPredicted RBP18.05■□□□□ 0.48
NUP43-205ENST00000463048 PIP5K1AQ99755 562 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 PSD2Q9BQI7 771 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 SFXN3Q9BWM7 321 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 MEPEQ9NQ76 525 aaPredicted RBP18.05■□□□□ 0.48
NUP43-205ENST00000463048 KLHL9Q9P2J3 617 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 EMC9Q9Y3B6 208 aa18.05■□□□□ 0.48
NUP43-205ENST00000463048 DNPH1O43598 174 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 OR2T1O43869 369 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 SS18L1O75177 396 aaPredicted RBP18.04■□□□□ 0.48
NUP43-205ENST00000463048 THRBP10828 461 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 NQO1P15559 274 aaKnown RBP18.04■□□□□ 0.48
NUP43-205ENST00000463048 ITGA2P17301 1181 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 AGTR1P30556 359 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 H3F3AP84243 136 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 FAM98BQ52LJ0 330 aaKnown RBP18.04■□□□□ 0.48
NUP43-205ENST00000463048 C1orf146Q5VVC0 180 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 TMEM225Q6GV28 225 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 ABLIM2Q6H8Q1 611 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 ZNF730Q6ZMV8 503 aa18.04■□□□□ 0.48
NUP43-205ENST00000463048 FAM214BQ7L5A3 538 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms