RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 LIMK1P53667 647 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 MLLT11Q13015 90 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-213ENST00000462730 EFR3AQ14156 821 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 GXYLT1Q4G148 440 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 SOWAHCQ53LP3 525 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-213ENST00000462730 C19orf48Q6RUI8 117 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 DHRS13Q6UX07 377 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 MEPCEQ7L2J0 689 aaKnown RBP13.19□□□□□ -0.3
HDAC6-213ENST00000462730 C10orf53Q8N6V4 93 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 OR5M3Q8NGP4 307 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 NUBPLQ8TB37 319 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 ERMAPQ96PL5 475 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-213ENST00000462730 RNF167Q9H6Y7 350 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 MCIDASD6RGH6 385 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 LRP3O75074 770 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 NUDT14O95848 222 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 MT-CO3P00414 261 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 IFNGP01579 166 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 LIMS3P0CW19 117 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 LIMS4P0CW20 117 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 PEPDP12955 493 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 GTF2E2P29084 291 aaKnown RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 WNT4P56705 351 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 SLC26A5P58743 744 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 CRMP1Q14194 572 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 TOMM34Q15785 309 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 CARTPTQ16568 116 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 KLHL12Q53G59 568 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF362Q5T0B9 420 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 OR2G6Q5TZ20 316 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 SLC37A3Q8NCC5 494 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 OR5W2Q8NH69 310 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 CENPOQ9BU64 300 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 RBMX2Q9Y388 322 aaKnown RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 PTRH2Q9Y3E5 179 aaKnown RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 PCDHGA1Q9Y5H4 931 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 CCDC182A6NF36 153 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF354AO60765 605 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 KLF7O75840 302 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 UMODP07911 640 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 GP1BBP13224 206 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 SPNP16150 400 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 PGCP20142 388 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 RPL4P36578 427 aaKnown RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 CD79BP40259 229 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 FBXW4P57775 412 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 RPS7P62081 194 aaKnown RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 DBPQ10586 325 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-213ENST00000462730 B3GLCTQ6Y288 498 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 LHFPL3Q86UP9 236 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 SIRT6Q8N6T7 355 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 CYB561A3Q8NBI2 242 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 OR51G2Q8NGK0 314 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 OR9Q1Q8NGQ5 310 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 TAAR9Q96RI9 348 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 ADAM19Q9H013 955 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 OR51V1Q9H2C8 321 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 C12orf10Q9HB07 376 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 CHRNA9Q9UGM1 479 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 IER3IP1Q9Y5U9 82 aa13.18□□□□□ -0.3
HDAC6-213ENST00000462730 A0A1W2PNU3 283 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-213ENST00000462730 TMEM200CA6NKL6 621 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 CENPBD1B2RD01 187 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 IGF2P01344 180 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 IGHA1P01876 353 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 PAICSP22234 425 aaKnown RBP13.17□□□□□ -0.3
HDAC6-213ENST00000462730 CBFBQ13951 182 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF74Q16587 644 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 HES3Q5TGS1 186 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 LIPKQ5VXJ0 399 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 POMZP3Q6PJE2 187 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 NANOGNBQ7Z5D8 188 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 FAM98AQ8NCA5 519 aaKnown RBP13.17□□□□□ -0.3
HDAC6-213ENST00000462730 PSD4Q8NDX1 1056 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 OR5L2Q8NGL0 311 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 GATAD2BQ8WXI9 593 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 PTP4A1Q93096 173 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 KISS1RQ969F8 398 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-213ENST00000462730 SECISBP2Q96T21 854 aaKnown RBP13.17□□□□□ -0.3
HDAC6-213ENST00000462730 ZPBPQ9BS86 351 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 DDA1Q9BW61 102 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 COL25A1Q9BXS0 654 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-213ENST00000462730 QPCTLQ9NXS2 382 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 PEX16Q9Y5Y5 336 aa13.17□□□□□ -0.3
HDAC6-213ENST00000462730 SPIN1Q9Y657 262 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-213ENST00000462730 PLD2O14939 933 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 GPX5O75715 221 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 CXCR1P25024 350 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 P2RX1P51575 399 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 SLC16A1P53985 500 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 RPS4XP62701 263 aaKnown RBP13.16□□□□□ -0.3
HDAC6-213ENST00000462730 EGR4Q05215 589 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 TRIP6Q15654 476 aaKnown RBP13.16□□□□□ -0.3
HDAC6-213ENST00000462730 ARMC4Q5T2S8 1044 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 DPY19L2P2Q6ZN68 376 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 PIP4P1Q86T03 277 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 OR52E2Q8NGJ4 325 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms