RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 H1F0P07305 194 aaKnown RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 LINGO3P0C6S8 592 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 RNH1P13489 461 aaKnown RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 PPP2R1BP30154 601 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 TTPAP49638 278 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 HNRNPFP52597 415 aaKnown RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 ERVFC1-1P60608 527 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 RPL36AP83881 106 aaKnown RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 RASA2Q15283 850 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 KLHL38Q2WGJ6 581 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 DEFB134Q4QY38 66 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 FASTKD1Q53R41 847 aaKnown RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 PIGGQ5H8A4 983 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 C6orf52Q5T4I8 152 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 KRT80Q6KB66 452 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 KLC3Q6P597 504 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 FAM47EQ6ZV65 393 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 CTAGE6Q86UF2 777 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 NFE4Q86UQ8 179 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 CDKL3Q8IVW4 592 aaPredicted RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 RCOR2Q8IZ40 523 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 CA13Q8N1Q1 262 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 OR8K1Q8NGG5 319 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 OR52K1Q8NGK4 314 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 ZPLD1Q8TCW7 415 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 LINGO1Q96FE5 620 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 ZFP3Q96NJ6 502 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 WFIKKN1Q96NZ8 548 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 FERMT1Q9BQL6 677 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 PIGQQ9BRB3 760 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 SFXN3Q9BWM7 321 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 ANGPTL4Q9BY76 406 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 PLA2G12AQ9BZM1 189 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 WNT5BQ9H1J7 359 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 SEMA6AQ9H2E6 1030 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 ANKZF1Q9H8Y5 726 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 ADAP2Q9NPF8 381 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 ANO10Q9NW15 660 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 CHMP5Q9NZZ3 219 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 C6orf203Q9P0P8 240 aaPredicted RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 FETUBQ9UGM5 382 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 KCNG2Q9UJ96 466 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 OSGIN1Q9UJX0 560 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 WIF1Q9Y5W5 379 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 CHCHD2Q9Y6H1 151 aaPredicted RBP4.21□□□□□ -1.74
COPS3-204ENST00000462236 ARHGAP32A7KAX9 2087 aa4.21□□□□□ -1.74
COPS3-204ENST00000462236 NOTCH3Q9UM47 2321 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 TRBC2A0A5B9 178 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ERI2A8K979 691 aaKnown RBP4.2□□□□□ -1.74
COPS3-204ENST00000462236 EEF1E1-BLOC1S5C9J1V9 151 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 C16orf97H3BN30 126 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 WWP2O00308 870 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 PSMD3O43242 534 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 EEF1E1O43324 174 aaKnown RBP4.2□□□□□ -1.74
COPS3-204ENST00000462236 NIPSNAP2O75323 286 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ZNF189O75820 626 aaPredicted RBP4.2□□□□□ -1.74
COPS3-204ENST00000462236 CATP04040 527 aaKnown RBP4.2□□□□□ -1.74
COPS3-204ENST00000462236 P04436 131 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 HPNP05981 417 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 SLC35G6P0C7Q6 338 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 MPC1LP0DKB6 136 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 GRIA1P42261 906 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 SLC6A12P48065 614 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 MMP15P51511 669 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ATP5J2P56134 94 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 HSD17B7P56937 341 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 EIF3EP60228 445 aaKnown RBP4.2□□□□□ -1.74
COPS3-204ENST00000462236 TBPL1P62380 186 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 CDH17Q12864 832 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 STX1AQ16623 288 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 CLEC12BQ2HXU8 276 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ZNF672Q499Z4 452 aaPredicted RBP4.2□□□□□ -1.74
COPS3-204ENST00000462236 SLC22A10Q63ZE4 541 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 PTRHD1Q6GMV3 140 aaKnown RBP4.2□□□□□ -1.74
COPS3-204ENST00000462236 OPN5Q6U736 354 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 C18orf65Q6ZTR6 163 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 C9orf139Q6ZV77 190 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ADCK2Q7Z695 626 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 LINC00523Q86TU6 105 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 PTOV1Q86YD1 416 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 LIX1Q8N485 282 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ZNF611Q8N823 705 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ZNF321PQ8N8H1 164 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 TC2NQ8N9U0 490 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 L3MBTL4Q8NA19 623 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 NUBPLQ8TB37 319 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ZNF721Q8TF20 911 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 KRT35Q92764 455 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 BAG1Q99933 345 aaPredicted RBP4.2□□□□□ -1.74
COPS3-204ENST00000462236 BPIFA3Q9BQP9 254 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 CCDC77Q9BR77 488 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 BTBD10Q9BSF8 475 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 UGT2B28Q9BY64 529 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 PCBD2Q9H0N5 130 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 SPNS1Q9H2V7 528 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 GOLPH3Q9H4A6 298 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 SLA2Q9H6Q3 261 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 EQTNQ9NQ60 294 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 YAE1D1Q9NRH1 226 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 FAM114A2Q9NRY5 505 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms