RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 RNH1P13489 461 aaKnown RBP13.36□□□□□ -0.27
NCL-207ENST00000461347 GK2Q14410 553 aaPredicted RBP13.36□□□□□ -0.27
NCL-207ENST00000461347 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.36□□□□□ -0.273e-16■■□□□ 14.5
NCL-207ENST00000461347 BEX5Q5H9J7 111 aa13.36□□□□□ -0.27
NCL-207ENST00000461347 GRAMD2AQ8IUY3 354 aa13.36□□□□□ -0.27
NCL-207ENST00000461347 ZNF584Q8IVC4 421 aa13.36□□□□□ -0.27
NCL-207ENST00000461347 GPR148Q8TDV2 347 aa13.36□□□□□ -0.27
NCL-207ENST00000461347 OR2S2Q9NQN1 319 aa13.36□□□□□ -0.27
NCL-207ENST00000461347 A0A0A6YYD5 115 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 RAB3DO95716 219 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 EGFP01133 1207 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 SORDQ00796 357 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 RAB11BQ15907 218 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 ARTNQ5T4W7 220 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 A0A0A6YYC8 382 aaPredicted RBP13.35□□□□□ -0.27
NCL-207ENST00000461347 EEF1E1-BLOC1S5C9J1V9 151 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 H0YGG7 62 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 I3L1I5 382 aaPredicted RBP13.35□□□□□ -0.27
NCL-207ENST00000461347 SRMP19623 302 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 ARF3P61204 181 aaPredicted RBP13.35□□□□□ -0.27
NCL-207ENST00000461347 TCTN1Q2MV58 587 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 CDNFQ49AH0 187 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 TMEM52BQ4KMG9 183 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 CD300LDQ6UXZ3 194 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 LINC01555Q8NAE3 123 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 FGF13Q92913 245 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 RASD2Q96D21 266 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 MRGPRX3Q96LB0 322 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 LINC00615Q96LM1 132 aaPredicted RBP13.35□□□□□ -0.27
NCL-207ENST00000461347 SLC6A7Q99884 636 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 CLDND1Q9NY35 253 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 FBXL4Q9UKA2 621 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 UGT2B7P16662 529 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 S1PR1P21453 382 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 SWI5Q1ZZU3 235 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 HEPHL1Q6MZM0 1159 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 CFAP77Q6ZQR2 320 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 NUP54Q7Z3B4 507 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 TMEM17Q86X19 198 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 CMTM4Q8IZR5 234 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 IL17RCQ8NAC3 791 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 C17orf47Q8NEP4 570 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 OR5T3Q8NGG3 340 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 TMEM106AQ96A25 262 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 ALG12Q9BV10 488 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 C6orf106Q9H6K1 298 aaPredicted RBP13.35□□□□□ -0.27
NCL-207ENST00000461347 NARFLQ9H6Q4 476 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 PPP1R3EQ9H7J1 279 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
NCL-207ENST00000461347 ZNF432O94892 652 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 RAB40ALP0C0E4 278 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 PTHLHP12272 177 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ATF1P18846 271 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 PBX2P40425 430 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 LIMS1P48059 325 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 PRKXP51817 358 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 UBE2MP61081 183 aaKnown RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 MRPS10P82664 201 aaKnown RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 ERV3-1Q14264 604 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 YOD1Q5VVQ6 348 aaPredicted RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 HAGHLQ6PII5 290 aaPredicted RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 TMEM205Q6UW68 189 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 SLC35F3Q8IY50 421 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 DNAAF1Q8NEP3 725 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 RAB40AQ8WXH6 277 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 PLEKHA1Q9HB21 404 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 PLCL2Q9UPR0 1127 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 MAP1BP46821 2468 aaKnown RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 ZNF593O00488 134 aaPredicted RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 LANCL1O43813 399 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ZNF35P13682 527 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ITGA3P26006 1051 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 SLC6A1P30531 599 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 AQP2P41181 271 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 OR3A2P47893 321 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 GRM7Q14831 915 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 FAM78AQ5JUQ0 283 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ARHGAP40Q5TG30 622 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 KCTD18Q6PI47 426 aaPredicted RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 OR9A4Q8NGU2 314 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 NCDNQ9UBB6 729 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ATPIF1Q9UII2 106 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ERVK-19Q9WJR5 959 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 RLN2P04090 185 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 HIST1H1CP16403 213 aaKnown RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 CXCL3P19876 107 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ACTBP60709 375 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 PRPS1P60891 318 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ACTG1P63261 375 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 BDH1Q02338 343 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 CAMK2BQ13554 666 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 RNASE10Q5GAN6 216 aaKnown RBP13.34□□□□□ -0.27
NCL-207ENST00000461347 KCTD20Q7Z5Y7 419 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 ZNF417Q8TAU3 575 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 Q96M85 177 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 KLK11Q9UBX7 282 aa13.34□□□□□ -0.27
NCL-207ENST00000461347 GPR89AB7ZAQ6 455 aa13.33□□□□□ -0.27
NCL-207ENST00000461347 GREM1O60565 184 aa13.33□□□□□ -0.27
NCL-207ENST00000461347 TNFP01375 233 aa13.33□□□□□ -0.27
NCL-207ENST00000461347 GPR89BP0CG08 455 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms