RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 EPS8Q12929 822 aa12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 OTUD3Q5T2D3 398 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 OR4F3Q6IEY1 312 aa12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 ZIC4Q8N9L1 334 aa12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 OR4A15Q8NGL6 344 aa12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 EPS8L3Q8TE67 593 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 ADAM19Q9H013 955 aa12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 SLC38A1Q9H2H9 487 aa12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 TMEM45AQ9NWC5 275 aa12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 LGALS13Q9UHV8 139 aa12.65□□□□□ -0.38
DNMT3A-207ENST00000461228 DYSFO75923 2080 aa12.65□□□□□ -0.39
DNMT3A-207ENST00000461228 TMEM72A0PK05 275 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 CFAP73A6NFT4 308 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 HMGN4O00479 90 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 FRS3O43559 492 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 SKAP2O75563 359 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 STAMBPO95630 424 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 OR4A8P0C604 315 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 TACR3P29371 465 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 P2RY4P51582 365 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 RIN1Q13671 783 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 CASP8Q14790 479 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 RNF220Q5VTB9 566 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 ANKRD16Q6P6B7 361 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 LRRC74BQ6ZQY2 392 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 AAED1Q7RTV5 226 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 CCDC36Q8IYA8 594 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 ZNF786Q8N393 782 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 TRIML2Q8N7C3 387 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 LINC01356Q8N9X3 169 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 SEMA6DQ8NFY4 1073 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 SLC35B4Q969S0 331 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 CCDC115Q96NT0 180 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 ANKRD27Q96NW4 1050 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 FOXN4Q96NZ1 517 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 NELFAQ9H3P2 528 aa12.64□□□□□ -0.39
DNMT3A-207ENST00000461228 NPIPB7O75200 414 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 SLU7O95391 586 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 DBIP07108 87 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 CECR9P0C854 216 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 OR12D1P0DN82 309 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 RYKP34925 604 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 EVX1P49640 407 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 UBE2NP61088 152 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 IQCCQ4KMZ1 466 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 HIKESHIQ53FT3 197 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 TNFAIP8L2Q6P589 184 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 IL17RELQ6ZVW7 336 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 TEX29Q8N6K0 151 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 IL17RDQ8NFM7 739 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 WDR60Q8WVS4 1066 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 ZNF385AQ96PM9 386 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 ALKBH3Q96Q83 286 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 MECRQ9BV79 373 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 MARCOQ9UEW3 520 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 BTNL2Q9UIR0 455 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 RASD1Q9Y272 281 aa12.63□□□□□ -0.39
DNMT3A-207ENST00000461228 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 PRAMEF27A3QJZ7 478 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 VSTM5A8MXK1 200 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 TMEM229AB2RXF0 380 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 E9PBE3 544 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 AP3D1O14617 1153 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 LILRA1O75019 489 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 DAOP14920 347 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 PGS1Q32NB8 556 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 MRPL2Q5T653 305 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 OGFOD2Q6N063 350 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 C5orf46Q6UWT4 87 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 ANKRD46Q86W74 232 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 ANKS4BQ8N8V4 417 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 AGR3Q8TD06 166 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 UBLCP1Q8WVY7 318 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 XAGE5Q8WWM1 108 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 CNOT9Q92600 299 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 BCL2L2Q92843 193 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 SLC35A5Q9BS91 424 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 C1QTNF6Q9BXI9 259 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 ZDHHC2Q9UIJ5 367 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 TMEFF2Q9UIK5 374 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 HAO1Q9UJM8 370 aa12.62□□□□□ -0.39
DNMT3A-207ENST00000461228 PKD1L1Q8TDX9 2849 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 CLDN24A6NM45 220 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 A8MVM7 634 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 B4DSR2 109 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 CHRM4P08173 479 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 ITGA2P17301 1181 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 APEX1P27695 318 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 ARR3P36575 388 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 ETV4P43268 484 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 MRPS11P82912 194 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 LIN52Q52LA3 116 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 GPAT3Q53EU6 434 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 C9orf135Q5VTT2 229 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 REP15Q6BDI9 236 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 WBP2NLQ6ICG8 309 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 ZCCHC23Q6ZST2 131 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 USP43Q70EL4 1123 aa12.61□□□□□ -0.39
DNMT3A-207ENST00000461228 CREB3L2Q70SY1 520 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms