RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 FIGNL1Q6PIW4 674 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 MED25Q71SY5 747 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 COMMD7Q86VX2 200 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 VRK2Q86Y07 508 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 PHF10Q8WUB8 498 aaKnown RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 OR10A5Q9H207 317 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 MTHFD2LQ9H903 347 aaPredicted RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 POLE4Q9NR33 117 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 USE1Q9NZ43 259 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 TREM2Q9NZC2 230 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 C3orf18Q9UK00 162 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 LYVE1Q9Y5Y7 322 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 PRR33A8MZF0 331 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 AHRRA9YTQ3 701 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 M0R3H8 397 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 CDX4O14627 284 aaPredicted RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 TRIM3O75382 744 aaPredicted RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 SOX30O94993 753 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 SCAF4O95104 1147 aaKnown RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 GADD45GO95257 159 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 ZIC2O95409 532 aaPredicted RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 AK1P00568 194 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 ZNF806P0C7X5 589 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 OR2B6P58173 313 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 DCDP81605 110 aaKnown RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 PSG6Q00889 435 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 ZFP36L1Q07352 338 aaKnown RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 FUT7Q11130 342 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 IL11RAQ14626 422 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 LARS2Q15031 903 aaKnown RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 FLYWCH1Q4VC44 716 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 EXOSC6Q5RKV6 272 aaKnown RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 DDI2Q5TDH0 399 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 SHISA6Q6ZSJ9 500 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 LAPTM4BQ86VI4 370 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 CYP4Z1Q86W10 505 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 CHDHQ8NE62 594 aaPredicted RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 OR52P1PQ8NH57 321 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 C16orf52Q8NHV5 167 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 ST7LQ8TDW4 575 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 SFT2D1Q8WV19 159 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 VSTM2LQ96N03 204 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 RDH12Q96NR8 316 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 TXN2Q99757 166 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 CHCHD6Q9BRQ6 235 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 ANKRD60Q9BZ19 345 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 VN1R1Q9GZP7 353 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 ZNF350Q9GZX5 532 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 SOX17Q9H6I2 414 aaPredicted RBP9.54□□□□□ -0.88
HERC4-207ENST00000460168 NIPAL2Q9H841 368 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 KLHL28Q9NXS3 571 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 COPZ2Q9P299 210 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 RHCGQ9UBD6 479 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 BAIAP2Q9UQB8 552 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 PCDHGB6Q9Y5F9 930 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 PCDHGA6Q9Y5G7 932 aa9.54□□□□□ -0.88
HERC4-207ENST00000460168 ZNF318Q5VUA4 2279 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 NUP210LQ5VU65 1888 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 CFAP54Q96N23 3096 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 IGKV3D-11A0A0A0MRZ8 115 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 A0A1B0GVC2 190 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 TCRBV16S1A1N1A0A5B0 115 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 RFPL4AA6NLU0 287 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 RFPL4AL1F8VTS6 287 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 NKX2-2O95096 273 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 LGI1O95970 557 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 SPI1P17947 270 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 IGFBP5P24593 272 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 THBS2P35442 1172 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 CAPGP40121 348 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 MAP3K8P41279 467 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 SPEM2Q0P670 501 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 EPS8Q12929 822 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 ELAVL1Q15717 326 aaKnown RBP9.53□□□□□ -0.88
HERC4-207ENST00000460168 TAB1Q15750 504 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 NNATQ16517 81 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 RFX4Q33E94 735 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 SLC36A3Q495N2 470 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 PABPC1L2AQ5JQF8 200 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 OR2B11Q5JQS5 317 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 ANKRD34AQ69YU3 496 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 TCTN3Q6NUS6 607 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 COX15Q7KZN9 410 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 RBM45Q8IUH3 476 aaKnown RBP9.53□□□□□ -0.88
HERC4-207ENST00000460168 SNX29P2Q8IUI4 249 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 NAXDQ8IW45 347 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 OR1M1Q8NGA1 313 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 STT3BQ8TCJ2 826 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 PTPMT1Q8WUK0 201 aaPredicted RBP9.53□□□□□ -0.88
HERC4-207ENST00000460168 SENP5Q96HI0 755 aaPredicted RBP9.53□□□□□ -0.88
HERC4-207ENST00000460168 WFDC6Q9BQY6 131 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 LMF2Q9BU23 707 aaKnown RBP9.53□□□□□ -0.88
HERC4-207ENST00000460168 OR8D2Q9GZM6 311 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 GABARAPL1Q9H0R8 117 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 TOR3AQ9H497 397 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 Q9N2J8 555 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 RXFP3Q9NSD7 469 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 IL19Q9UHD0 177 aa9.53□□□□□ -0.88
HERC4-207ENST00000460168 COL5A1P20908 1838 aaPredicted RBP9.53□□□□□ -0.88
HERC4-207ENST00000460168 GXYLT2A0PJZ3 443 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms