RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 GABRA5P31644 462 aa8.32□□□□□ -1.08
SHROOM4-203ENST00000460112 IL10RAQ13651 578 aa8.32□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF266Q14584 549 aa8.32□□□□□ -1.08
SHROOM4-203ENST00000460112 FAM162BQ5T6X4 162 aa8.32□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF585AQ6P3V2 769 aa8.32□□□□□ -1.08
SHROOM4-203ENST00000460112 CNIH2Q6PI25 160 aa8.32□□□□□ -1.08
SHROOM4-203ENST00000460112 SLC41A2Q96JW4 573 aa8.32□□□□□ -1.08
SHROOM4-203ENST00000460112 CLEC3BP05452 202 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SLC22A6Q4U2R8 563 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 RPL22L1Q6P5R6 122 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 OSTM1Q86WC4 334 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 PPP1R3BQ86XI6 285 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SEMA6DQ8NFY4 1073 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 OR10R2Q8NGX6 335 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 DMRT3Q9NQL9 472 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 GNG12Q9UBI6 72 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SSUH2Q9Y2M2 353 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 TO15178 435 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 EIF1BO60739 113 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 XCR1P46094 333 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 RBMS2Q15434 407 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 PPP1R3AQ16821 1122 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 PAGE3Q5JUK9 113 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 OR2T27Q8NH04 317 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 FER1L6-AS2Q96M78 137 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SEC22CQ9BRL7 303 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 TIMM29Q9BSF4 260 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ULBP3Q9BZM4 244 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 MFFQ9GZY8 342 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ADAM19Q9H013 955 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 DCAF13Q9NV06 445 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 PCDHGA5Q9Y5G8 931 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 TRBV11-1A0A0K0K1C0 115 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 VIPR2P41587 438 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SLC15A4Q8N697 577 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 EHFQ9NZC4 300 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 EBF1Q9UH73 591 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ADAM29Q9UKF5 820 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 TCRBV3S1A0A5B6 114 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ADAM12O43184 909 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 NUDT21O43809 227 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ZIC2O95409 532 aaPredicted RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 STSP08842 583 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 DTYMKP23919 212 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 RPS18P62269 152 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 TBC1D28Q2M2D7 210 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 OR52W1Q6IF63 320 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 NLGN4XQ8N0W4 816 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 B3GNT7Q8NFL0 401 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF566Q969W8 418 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 CCDC74AQ96AQ1 378 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SAMD8Q96LT4 415 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 C10orf90Q96M02 699 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 RNF32Q9H0A6 362 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 CACNA1HO95180 2353 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SDHDO14521 159 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 BMPR1AP36894 532 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF322Q6U7Q0 402 aaPredicted RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 RNF113BQ8IZP6 322 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 NKAIN3Q8N8D7 197 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 THAP7Q9BT49 309 aaPredicted RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 VN1R3Q9BXE9 311 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 GNB4Q9HAV0 340 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 UBQLN4Q9NRR5 601 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 POT1Q9NUX5 634 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 MOKQ9UQ07 419 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SLC14A1Q13336 389 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SLC16A14Q7RTX9 510 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 GLB1L2Q8IW92 636 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 INTS12Q96CB8 462 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 CCDC74BQ96LY2 380 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 TRIB1Q96RU8 372 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 PIGQQ9BRB3 760 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 DPH1Q9BZG8 443 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SYNPO2LQ9H987 977 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 RHBDD3Q9Y3P4 386 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 NPIPA5A0A0B4J1W7 369 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SMLR1H3BR10 107 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 TAGLN2P37802 199 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SELENOWP63302 87 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 SFRP4Q6FHJ7 346 aaPredicted RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ADGRG3Q86Y34 549 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 NHLRC2Q8NBF2 726 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 TMEM185AQ8NFB2 350 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 DCLRE1CQ96SD1 692 aaKnown RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 THSD1Q9NS62 852 aa8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF443Q9Y2A4 671 aaPredicted RBP8.31□□□□□ -1.08
SHROOM4-203ENST00000460112 FADS1O60427 444 aa8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 STC2O76061 302 aa8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 CT45A10P0DMU9 189 aa8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 FUT1P19526 365 aa8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 SERPINA2P20848 420 aa8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 HOXD11P31277 338 aaPredicted RBP8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 CISD2Q8N5K1 135 aaKnown RBP8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 BORCS6Q96GS4 357 aa8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 DPH2Q9BQC3 489 aaPredicted RBP8.3□□□□□ -1.08
SHROOM4-203ENST00000460112 EGLN3Q9H6Z9 239 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms