RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ANKS4BQ8N8V4 417 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 VPS37AQ8NEZ2 397 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 NUP37Q8NFH4 326 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 OR1K1Q8NGR3 316 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 TCP10LQ8TDR4 215 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.07□□□□□ -0.966e-8■■■□□ 17.2
HDLBP-227ENST00000458564 HPS1Q92902 700 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 C3orf49Q96BT1 292 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 KCNS3Q9BQ31 491 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 SOX7Q9BT81 388 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 DPY30Q9C005 99 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 ZNF442Q9H7R0 627 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 TMEM45AQ9NWC5 275 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 MARCOQ9UEW3 520 aaPredicted RBP9.07□□□□□ -0.96
HDLBP-227ENST00000458564 LGALS13Q9UHV8 139 aa9.07□□□□□ -0.96
HDLBP-227ENST00000458564 CFAP73A6NFT4 308 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 ZNF587BE7ETH6 402 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 KLF11O14901 512 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 TCF21O43680 179 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 AKR7A3O95154 331 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 VAMP5O95183 116 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 IGKV3-15P01624 115 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 BPGMP07738 259 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 CHRM4P08173 479 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 OR4A8P0C604 315 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 CECR9P0C854 216 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 CHI3L1P36222 383 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-227ENST00000458564 ETV4P43268 484 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 SH3BGRP55822 239 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-227ENST00000458564 NAAAQ02083 359 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 CEACAM7Q14002 265 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 GNA13Q14344 377 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 CARTPTQ16568 116 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 IQCCQ4KMZ1 466 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 MRPL2Q5T653 305 aaKnown RBP9.06□□□□□ -0.96
HDLBP-227ENST00000458564 LRRC74BQ6ZQY2 392 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 HMGN2P46Q86SG4 172 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 ZNF440Q8IYI8 595 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 TMEM99Q8N816 258 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 ANKK1Q8NFD2 765 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 OR4F15Q8NGB8 312 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 WDR60Q8WVS4 1066 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 BCL2L2Q92843 193 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-227ENST00000458564 C1orf159Q96HA4 380 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 CCDC115Q96NT0 180 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 ALKBH3Q96Q83 286 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-227ENST00000458564 VRK1Q99986 396 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-227ENST00000458564 SLC35A5Q9BS91 424 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 RAB1BQ9H0U4 201 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 NELFAQ9H3P2 528 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 AKTIPQ9H8T0 292 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 MTHFD2LQ9H903 347 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-227ENST00000458564 BTNL2Q9UIR0 455 aa9.06□□□□□ -0.96
HDLBP-227ENST00000458564 E9PBE3 544 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 FRS3O43559 492 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 LILRA1O75019 489 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 STAMBPO95630 424 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 LGI1O95970 557 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 DBIP07108 87 aaKnown RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 CDH2P19022 906 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 ANXA11P50995 505 aaKnown RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 CHN2P52757 468 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 CLNS1AP54105 237 aaKnown RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 UBE2NP61088 152 aaKnown RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 POU3F1Q03052 451 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 OR7A5Q15622 319 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 SYPL1Q16563 259 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 SPANXN4Q5MJ08 99 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 ANKRD16Q6P6B7 361 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 CREB3L2Q70SY1 520 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 SPATA19Q7Z5L4 167 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 GPAT4Q86UL3 456 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 RNF130Q86XS8 419 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 ANKFN1Q8N957 763 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 NEU4Q8WWR8 484 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 AURKBQ96GD4 344 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-227ENST00000458564 LINC00470Q9BZP3 86 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 PCDHB14Q9Y5E9 798 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 TENM1Q9UKZ4 2725 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 DSPPQ9NZW4 1301 aa9.05□□□□□ -0.96
HDLBP-227ENST00000458564 A0A096LPI6 279 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 TLDC2A0PJX2 215 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 LRP5LA4QPB2 252 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 CDHR4A6H8M9 788 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 A8MVM7 634 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 RPL36A-HNRNPH2H7BZ11 118 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 TYROBPO43914 113 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 FZD7O75084 574 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 NPIPB7O75200 414 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 SPAG7O75391 227 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 KRT33AO76009 404 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 SNUPNO95149 360 aaKnown RBP9.04□□□□□ -0.96
HDLBP-227ENST00000458564 CPSF4O95639 269 aaKnown RBP9.04□□□□□ -0.96
HDLBP-227ENST00000458564 C1QCP02747 245 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 ERCC1P07992 297 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-227ENST00000458564 DAOP14920 347 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 IL7RP16871 459 aa9.04□□□□□ -0.96
HDLBP-227ENST00000458564 CXCR1P25024 350 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms